RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 PIPSLA2A3N6 862 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 CDC14CA4D256 554 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 KLHL33A6NCF5 533 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 TLCD2A6NGC4 264 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 MROH6A6NGR9 719 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 GOLGA6L6A8MZA4 724 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 E7EVH7 732 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 IFRD1O00458 451 aaPredicted RBP9.33□□□□□ -0.92
MSH5-218ENST00000494646 SUV39H1O43463 412 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 KRT86O43790 486 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 ZNF189O75820 626 aaPredicted RBP9.33□□□□□ -0.92
MSH5-218ENST00000494646 ZSCAN5DPP0CG00 497 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 NDUFS1P28331 727 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 PRDX3P30048 256 aaKnown RBP9.33□□□□□ -0.92
MSH5-218ENST00000494646 TERF1P54274 439 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 CSE1LP55060 971 aaKnown RBP9.33□□□□□ -0.92
MSH5-218ENST00000494646 HSD11B2P80365 405 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 MC1RQ01726 317 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 KCNC4Q03721 635 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 DNASE1L3Q13609 305 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 RPS6KA1Q15418 735 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 OASLQ15646 514 aaKnown RBP9.33□□□□□ -0.92
MSH5-218ENST00000494646 TMTC4Q5T4D3 741 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 MEI1Q5TIA1 1274 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 PRAMEF17Q5VTA0 474 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 ZNF449Q6P9G9 518 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 LINC00523Q86TU6 105 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 D2HGDHQ8N465 521 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 GLIS1Q8NBF1 620 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 ACVR1CQ8NER5 493 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 OR6P1Q8NGX9 317 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 CT55Q8WUE5 264 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 ELMO1Q92556 727 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 TFGQ92734 400 aaPredicted RBP9.33□□□□□ -0.92
MSH5-218ENST00000494646 HDAC10Q969S8 669 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 ABHD17AQ96GS6 310 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 ZNF778Q96MU6 729 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 C19orf43Q9BQ61 176 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
MSH5-218ENST00000494646 TLR10Q9BXR5 811 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 SRMSQ9H3Y6 488 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 LZTFL1Q9NQ48 299 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 RAB6BQ9NRW1 208 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 MYO18BQ8IUG5 2567 aa9.33□□□□□ -0.92
MSH5-218ENST00000494646 FLNBO75369 2602 aaKnown RBP9.33□□□□□ -0.92
MSH5-218ENST00000494646 COL12A1Q99715 3063 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 GOLGA6L3A6NEY3 463 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 BTN3A1O00481 513 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 OR1I1O60431 355 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 SCRG1O75711 98 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 WISP1O95388 367 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 ZBTB11O95625 1053 aaPredicted RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 GAS8O95995 478 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 GOT2P00505 430 aaKnown RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 MT-ND3P03897 115 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 PVRP15151 417 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 ST6GAL1P15907 406 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 FOXN2P32314 431 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 FDFT1P37268 417 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 NSG1P42857 185 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 CD151P48509 253 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 RPS18P62269 152 aaKnown RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 CDH17Q12864 832 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 ZNF658BQ4V348 819 aaPredicted RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 CYB5D1Q6P9G0 228 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 ATG14Q6ZNE5 492 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 LDB1Q86U70 411 aaPredicted RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 BPHLQ86WA6 291 aaPredicted RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 AMIGO1Q86WK6 493 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 KMT5CQ86Y97 462 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 TMEM126BQ8IUX1 230 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 SLC38A9Q8NBW4 561 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 OR52E1Q8NGJ3 308 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 OR4L1Q8NH43 312 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 APOBEC4Q8WW27 367 aaKnown RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 MR1Q95460 341 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 ZNF501Q96CX3 271 aaPredicted RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 CD180Q99467 661 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 HGH1Q9BTY7 390 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 TMUB1Q9BVT8 246 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 TSGA10Q9BZW7 698 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 TWSG1Q9GZX9 223 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 ADNPQ9H2P0 1102 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 VPS37BQ9H9H4 285 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 KCND3Q9UK17 655 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 TDRKHQ9Y2W6 561 aaKnown RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 PRRC2CQ9Y520 2896 aaKnown RBP9.32□□□□□ -0.92
MSH5-218ENST00000494646 SPTA1P02549 2419 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 RELNP78509 3460 aa9.32□□□□□ -0.92
MSH5-218ENST00000494646 HEATR9A2RTY3 570 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 K7EM74 188 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 CREG1O75629 220 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 SUN1O94901 812 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 AP2A2O94973 939 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 APRTP07741 180 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 OR56A5P0C7T3 313 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 NR1D1P20393 614 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 ADRA1DP25100 572 aa9.31□□□□□ -0.92
MSH5-218ENST00000494646 RPL22P35268 128 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms