RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PDCD4Q53EL6 469 aaKnown RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ALFQ53S48 1182 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 RABGAP1LQ5R372 815 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 PIP5KL1Q5T9C9 394 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF658Q5TYW1 1059 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SEL1L3Q68CR1 1132 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 CRTC1Q6UUV9 634 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 LINGO4Q6UY18 593 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 DSG4Q86SJ6 1040 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 TMEM110Q86TL2 294 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 HORMAD1Q86X24 394 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 CREBRFQ8IUR6 639 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 DEFB106AQ8N104 65 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 LSMEM2Q8N112 164 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SLC22A18ASQ8N1D0 253 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 WDTC1Q8N5D0 677 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ATP6V0D2Q8N8Y2 350 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF527Q8NB42 609 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 MAPK15Q8TD08 544 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 KCNE4Q8WWG9 221 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF566Q969W8 418 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 FAM131CQ96AQ9 280 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ARRDC3Q96B67 414 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ATXN7L3BQ96GX2 97 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 VCPIP1Q96JH7 1222 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 BMFQ96LC9 184 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SPATA5L1Q9BVQ7 753 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 TLR10Q9BXR5 811 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 THAP9Q9H5L6 903 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 POLR1BQ9H9Y6 1135 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 POPDC2Q9HBU9 364 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 UBE2TQ9NPD8 197 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 DDIT4Q9NX09 232 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 IPO11Q9UI26 975 aaKnown RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SATB2Q9UPW6 733 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 CDYLQ9Y232 598 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 NEU2Q9Y3R4 380 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 OR51B4Q9Y5P0 310 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SNX10Q9Y5X0 201 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 U3KQA8 63 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 A0A0D9SEW6 157 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 GOLGA6L3A6NEY3 463 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 AHRRA9YTQ3 701 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 M0QYG6 137 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 MYO1CO00159 1063 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 RNASET2O00584 256 aaKnown RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF185O15231 689 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 RAD51BO15315 384 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 THAP12O43422 761 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SRGAP2O75044 1071 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 ADCY5O95622 1261 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 IGLV3-25P01717 112 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 ALPPL2P10696 532 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SLC2A3P11169 496 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SRCP12931 536 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 C6P13671 934 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 HNRNPA2B1P22626 353 aaKnown RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 RBMS1P29558 406 aaKnown RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 AKT2P31751 481 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 CCR1P32246 355 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 NUDT1P36639 197 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 DUSP3P51452 185 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 STX17P56962 302 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 ERVPABLB-1P60509 514 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 CETN1Q12798 172 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 C1orf61Q13536 156 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 FZD2Q14332 565 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 DRAP1Q14919 205 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 ISXQ2M1V0 245 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 DEFB133Q30KQ1 61 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 TPRG1LQ5T0D9 272 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 KLHL10Q6JEL2 608 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 ARMC6Q6NXE6 501 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 PGBD2Q6P3X8 592 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 GJB7Q6PEY0 223 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 GCNT7Q6ZNI0 430 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 DPY19L3Q6ZPD9 716 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 ERN2Q76MJ5 926 aaKnown RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 BEND5Q7L4P6 421 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 EFL1Q7Z2Z2 1120 aaKnown RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 PTAR1Q7Z6K3 402 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 TXLNBQ8N3L3 684 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SLC15A4Q8N697 577 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 OR2A12Q8NGT7 310 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 LMX1AQ8TE12 382 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SMARCE1Q969G3 411 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 FEM1CQ96JP0 617 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 PPP1R13BQ96KQ4 1090 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SLC46A1Q96NT5 459 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 MOGAT1Q96PD6 335 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 GSDMAQ96QA5 445 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 PPP1R9BQ96SB3 815 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 CPXM1Q96SM3 734 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 PSMB7Q99436 277 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 CRACR2AQ9BSW2 395 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SLC17A9Q9BYT1 436 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 SCAND2PQ9GZW5 306 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-219ENST00000494323 PREBQ9HCU5 417 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 ASCL3Q9NQ33 180 aa5.21□□□□□ -1.58
PTCD3-219ENST00000494323 CASS4Q9NQ75 786 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms