RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TUBB3Q13509 450 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 COL9A2Q14055 689 aaPredicted RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 SEMA3AQ14563 771 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 IL11RAQ14626 422 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 ZNF658BQ4V348 819 aaPredicted RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 AARS2Q5JTZ9 985 aaKnown RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 TMTC4Q5T4D3 741 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 ANKRD22Q5VYY1 191 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 PTRHD1Q6GMV3 140 aaKnown RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 C16orf46Q6P387 395 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 LRRC8BQ6P9F7 803 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 PCSK4Q6UW60 755 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 C6orf15Q6UXA7 325 aaPredicted RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 SDCCAG8Q86SQ7 713 aaPredicted RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 AMIGO1Q86WK6 493 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 PPP1R3BQ86XI6 285 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 KRT222Q8N1A0 295 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 GALNT6Q8NCL4 622 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 OR5AR1Q8NGP9 310 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 CFAP61Q8NHU2 1237 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 SNRNP27Q8WVK2 155 aaKnown RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 SKA2Q8WVK7 121 aaPredicted RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 MFSD3Q96ES6 412 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 SLC41A2Q96JW4 573 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 KLHL25Q9H0H3 589 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 TRIT1Q9H3H1 467 aaKnown RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 KCNF1Q9H3M0 494 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 MVB12BQ9H7P6 319 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 GPN2Q9H9Y4 310 aaPredicted RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 SYBUQ9NX95 663 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 SIDT1Q9NXL6 827 aaKnown RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 MARCH4Q9P2E8 410 aaPredicted RBP7.04□□□□□ -1.28
RBM39-239ENST00000494274 RARRES3Q9UL19 164 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 PCDHGA4Q9Y5G9 962 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 LRRK1Q38SD2 2015 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 WDFY3Q8IZQ1 3526 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 LAMA5O15230 3695 aa7.04□□□□□ -1.28
RBM39-239ENST00000494274 DSPP15924 2871 aaKnown RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 CHD6Q8TD26 2715 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 SLC5A10A0PJK1 596 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 USP27XA6NNY8 438 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 BHMG1C9JSJ3 638 aaPredicted RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 TK2O00142 265 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 PRMT5O14744 637 aaPredicted RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 NKX2-8O15522 239 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 MAP3K7O43318 606 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 KATNA1O75449 491 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 ZBTB11O95625 1053 aaPredicted RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 NTRK1P04629 796 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 APOA4P06727 396 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 CCNYL3P0C7X3 344 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 EBLN1P0CF75 366 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 PRKAR1AP10644 381 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 FGF5P12034 268 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TPSB2P20231 275 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 PRDX3P30048 256 aaKnown RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 FMO4P31512 558 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 CCR7P32248 378 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TTPAP49638 278 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 GNG11P61952 73 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 PLOD1Q02809 727 aaPredicted RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 C19orf57Q0VDD7 668 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 KCNJ11Q14654 390 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TPSAB1Q15661 275 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 GPR19Q15760 415 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TBR1Q16650 682 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
RBM39-239ENST00000494274 PWWP2BQ6NUJ5 590 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 CYB5D1Q6P9G0 228 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 FAM199XQ6PEV8 388 aaPredicted RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 PACS1Q6VY07 963 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 HOOK3Q86VS8 718 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TBC1D21Q8IYX1 336 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 MPP5Q8N3R9 675 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 ESX1Q8N693 406 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 LSM14AQ8ND56 463 aaKnown RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 GSDMBQ8TAX9 411 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 ACTRT1Q8TDG2 376 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 ASZ1Q8WWH4 475 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 CPT1BQ92523 772 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TTC9Q92623 222 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 PEX13Q92968 403 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 STAMBPL1Q96FJ0 436 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 CD180Q99467 661 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 KIFC1Q9BW19 673 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 CARD6Q9BX69 1037 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TSSK1BQ9BXA7 367 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TFB2MQ9H5Q4 396 aaKnown RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 FGF21Q9NSA1 209 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 KCND1Q9NSA2 647 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 TREX1Q9NSU2 369 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 RYDENQ9NUL5 291 aaKnown RBP7.03□□□□□ -1.28
RBM39-239ENST00000494274 SAMD15Q9P1V8 674 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 SEMA5BQ9P283 1151 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 CIDEBQ9UHD4 219 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 IL17BQ9UHF5 180 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 POLG2Q9UHN1 485 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 PADI1Q9ULC6 663 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 PLAGL1Q9UM63 463 aa7.03□□□□□ -1.28
RBM39-239ENST00000494274 SNX12Q9UMY4 172 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms