RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PLD1Q13393 1074 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 HNRNPDQ14103 355 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 RBM39Q14498 530 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ZNF273Q14593 569 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SLC39A14Q15043 492 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ZRSR1Q15695 479 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 BTBD16Q32M84 506 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 LRIT3Q3SXY7 679 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 GALNTL6Q49A17 601 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 KCTD21Q4G0X4 260 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FSCBQ5H9T9 825 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TMEM196Q5HYL7 178 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ZNF484Q5JVG2 852 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CBWD5Q5RIA9 395 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SH2D4BQ5SQS7 431 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CEP85LQ5SZL2 805 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 C1orf185Q5T7R7 199 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 C9orf57Q5W0N0 161 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ARHGAP17Q68EM7 881 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 RINT1Q6NUQ1 792 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TTI2Q6NXR4 508 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 DENND1BQ6P3S1 775 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 NOTUMQ6P988 496 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CORO6Q6QEF8 472 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 C15orf39Q6ZRI6 1047 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SPATA19Q7Z5L4 167 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 VASH2Q86V25 355 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 COMTD1Q86VU5 262 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TICAM1Q8IUC6 712 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PSTKQ8IV42 348 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ARHGAP12Q8IWW6 846 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ZNF679Q8IYX0 411 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ELMOD2Q8IZ81 293 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FAM185AQ8N0U4 392 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MUC20Q8N307 709 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 RASGEF1CQ8N431 466 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MINDY1Q8N5J2 469 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PI4KAP1Q8N8J0 262 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 IQUBQ8NA54 791 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 IL17RCQ8NAC3 791 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TMEM116Q8NCL8 245 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 LPCAT1Q8NF37 534 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TRIM58Q8NG06 486 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 NEK11Q8NG66 645 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 OR8K5Q8NH50 307 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 LILRB4Q8NHJ6 448 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ZNF671Q8TAW3 534 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TMEM186Q96B77 213 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 INTS12Q96CB8 462 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TMCO6Q96DC7 493 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SAT2Q96F10 170 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 C14orf79Q96F83 325 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TPD52L3Q96J77 140 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ART5Q96L15 291 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SAMD8Q96LT4 415 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 NAP1L3Q99457 506 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 HNRNPABQ99729 332 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PKP2Q99959 881 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 UQCC2Q9BRT2 126 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SIKE1Q9BRV8 207 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 KIFC3Q9BVG8 833 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CARD6Q9BX69 1037 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CACNG6Q9BXT2 260 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MOV10L1Q9BXT6 1211 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FAM129AQ9BZQ8 928 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SLC32A1Q9H598 525 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TFB2MQ9H5Q4 396 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 HAUS4Q9H6D7 363 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CATSPERBQ9H7T0 1116 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 GORASP2Q9H8Y8 452 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SYTL2Q9HCH5 934 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MAGEE1Q9HCI5 957 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 HPS4Q9NQG7 708 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PRMT8Q9NR22 394 aaPredicted RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 PCDHB16Q9NRJ7 776 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ARHGEF38Q9NXL2 777 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 VPS18Q9P253 973 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ANKMY1Q9P2S6 941 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SPASTQ9UBP0 616 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 BAIAP2L1Q9UHR4 511 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 ATP6V1HQ9UI12 483 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MAD2L2Q9UI95 211 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CDH22Q9UJ99 828 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 CCPG1Q9ULG6 757 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 FZD10Q9ULW2 581 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 NFU1Q9UMS0 254 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SUFUQ9UMX1 484 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 KCNK7Q9Y2U2 307 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 TDRKHQ9Y2W6 561 aaKnown RBP2.2□□□□□ -2.06
PTPN12-212ENST00000494248 COMMD3-BMI1R4GMX3 469 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 U3KQV3 271 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 SPACA6W5XKT8 324 aa2.2□□□□□ -2.06
PTPN12-212ENST00000494248 MYO3BQ8WXR4 1341 aa2.19□□□□□ -2.06
PTPN12-212ENST00000494248 FAM230AA0A1W2PPH8 454 aa2.19□□□□□ -2.06
PTPN12-212ENST00000494248 A0A1W2PQM1 296 aa2.19□□□□□ -2.06
PTPN12-212ENST00000494248 OR2A25A4D2G3 310 aa2.19□□□□□ -2.06
PTPN12-212ENST00000494248 ZSCAN5BA6NJL1 495 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms