RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 MAGEC3Q8TD91 643 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 NAT14Q8WUY8 206 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 SKA2Q8WVK7 121 aaPredicted RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 ZFPM2Q8WW38 1151 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 FAM136AQ96C01 138 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 LINGO1Q96FE5 620 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 SMC6Q96SB8 1091 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 GTPBP2Q9BX10 602 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 VPS11Q9H270 941 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 OR52A5Q9H2C5 316 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 TCEAL2Q9H3H9 227 aaPredicted RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 STN1Q9H668 368 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 TMBIM4Q9HC24 238 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 SSU72Q9NP77 194 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 SEMA4GQ9NTN9 838 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 EVA1BQ9NVM1 165 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 DNAAF2Q9NVR5 837 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 NLGN3Q9NZ94 848 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 GALPQ9UBC7 116 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 GULP1Q9UBP9 304 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 CTNNAL1Q9UBT7 734 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 FAM8A1Q9UBU6 413 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 DCDC2Q9UHG0 476 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 TSR3Q9UJK0 312 aaKnown RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 CDYLQ9Y232 598 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 PCYT1BQ9Y5K3 369 aaPredicted RBP12.16□□□□□ -0.46
SNX17-208ENST00000493711 COLEC10Q9Y6Z7 277 aa12.16□□□□□ -0.46
SNX17-208ENST00000493711 FRYLO94915 3013 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 YY2O15391 372 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 SNX2O60749 519 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 KLHL2O95198 593 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 WISP3O95389 354 aaPredicted RBP12.15□□□□□ -0.46
SNX17-208ENST00000493711 CATP04040 527 aaKnown RBP12.15□□□□□ -0.46
SNX17-208ENST00000493711 ENO2P09104 434 aaPredicted RBP12.15□□□□□ -0.46
SNX17-208ENST00000493711 RBP1P09455 135 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 PREPP48147 710 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 C1orf61Q13536 156 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 ACAP2Q15057 778 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 HSP90B2PQ58FF3 399 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 ACSBG2Q5FVE4 666 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 TNFAIP8L3Q5GJ75 292 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 CAPRIN2Q6IMN6 1127 aaKnown RBP12.15□□□□□ -0.46
SNX17-208ENST00000493711 FAM83HQ6ZRV2 1179 aaPredicted RBP12.15□□□□□ -0.46
SNX17-208ENST00000493711 ADAMTSL2Q86TH1 951 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 CPNE9Q8IYJ1 553 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 CYP4X1Q8N118 509 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 MINDY1Q8N5J2 469 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 FAM46DQ8NEK8 389 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 SAP25Q8TEE9 199 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 EEF1AKMT1Q8WVE0 214 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 SLC30A3Q99726 388 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 SH3GL2Q99962 352 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 TRIM54Q9BYV2 358 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 WWP1Q9H0M0 922 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 MVB12BQ9H7P6 319 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 MKS1Q9NXB0 559 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 TBC1D29Q9UFV1 150 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 POLG2Q9UHN1 485 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 GRID1Q9ULK0 1009 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 NOVA2Q9UNW9 492 aaKnown RBP12.15□□□□□ -0.46
SNX17-208ENST00000493711 PLEKHM1Q9Y4G2 1056 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 MYLKQ15746 1914 aa12.15□□□□□ -0.46
SNX17-208ENST00000493711 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 LNP1A1A4G5 178 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 A6NCN8 305 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 HMGB1P1B2RPK0 211 aaPredicted RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 AGPSO00116 658 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 COPEO14579 308 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 ZBTB14O43829 449 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 GLRA3O75311 464 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 MATN4O95460 622 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 TSPAN12O95859 305 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 XRCC1P18887 633 aaPredicted RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 KRT4P19013 534 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 CYP2A7P20853 494 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 AK4P27144 223 aaPredicted RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 ACADLP28330 430 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 PDHA2P29803 388 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 CRHR1P34998 444 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 RPIAP49247 311 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 SLC18A2Q05940 514 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 KRT33BQ14525 404 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 SHBQ15464 509 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 PRAMEF14Q5SWL7 426 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 IYDQ6PHW0 289 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 OGFOD3Q6PK18 319 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 CYHR1Q6ZMK1 362 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 CLEC14AQ86T13 490 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 SLC9B2Q86UD5 537 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 SRRM1Q8IYB3 904 aaKnown RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 TBC1D21Q8IYX1 336 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 FBXO15Q8NCQ5 510 aaPredicted RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 OR6C4Q8NGE1 309 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 CCL4L1Q8NHW4 92 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 RHEBL1Q8TAI7 183 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 STAG3L4Q8TBR4 150 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 MCOLN3Q8TDD5 553 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 ZDHHC1Q8WTX9 485 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 ASB11Q8WXH4 323 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms