RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RNF145Q96MT1 663 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 DCLRE1CQ96SD1 692 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF251Q9BRH9 671 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 QRSL1Q9H0R6 528 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 LHX5Q9H2C1 402 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 PPP1R14DQ9NXH3 145 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ERAP1Q9NZ08 941 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 POLG2Q9UHN1 485 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 U3KQ87 197 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 A0A0A6YYJ9 748 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 GSTA4O15217 222 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 POP7O75817 140 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CBX7O95931 251 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 POMCP01189 267 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FGF3P11487 239 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TYK2P29597 1187 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CRHR1P34998 444 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CLCN4P51793 760 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 EPHA5P54756 1037 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 SCN1BQ07699 218 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 DDR2Q16832 855 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FAM76BQ5HYJ3 339 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FKBP1CQ5VVH2 108 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ANKS6Q68DC2 871 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 RHOUQ7L0Q8 258 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 KAT5Q92993 513 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FAF2Q96CS3 445 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 MRPL48Q96GC5 212 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ATXN7L3BQ96GX2 97 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 PCDHB18PQ96TA0 734 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 PRDM9Q9NQV7 894 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 MCUBQ9NWR8 336 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 SAE1Q9UBE0 346 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CTSFQ9UBX1 484 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF70Q9UC06 446 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 MGAT4AQ9UM21 535 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 KCNH4Q9UQ05 1017 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 LIPT1Q9Y234 373 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FARP1Q9Y4F1 1045 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CXorf49A8MYA2 514 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CHURC1-FNTBB4DL54 471 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 LGALS8O00214 317 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 DLGAP1O14490 977 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TXNL1O43396 289 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RAD17O75943 681 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 DHFRP00374 187 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 C9P02748 559 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CYP11A1P05108 521 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 IL6P05231 212 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ATP6V1B2P21281 511 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 MPSTP25325 297 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SSTR2P30874 369 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 GSTM5P46439 218 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RPS5P46782 204 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RARRES1P49788 294 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 UGT2B15P54855 530 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 PER3P56645 1201 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF280AP59817 542 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 EMX1Q04741 257 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SLC3A1Q07837 685 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 DUSP4Q13115 394 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ATP6AP1Q15904 470 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ATP13A4Q4VNC1 1196 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ANKRD39Q53RE8 183 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ZC3H12BQ5HYM0 836 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 GNASQ5JWF2 1037 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SPOUT1Q5T280 376 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 GDPD1Q8N9F7 314 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TXNDC5Q8NBS9 432 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 DCAF4Q8WV16 495 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 CPT1BQ92523 772 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RAB7BQ96AH8 199 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 POM121Q96HA1 1249 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 BTN2A3PQ96KV6 586 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 VRK1Q99986 396 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SLC30A2Q9BRI3 323 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 DHRS4Q9BTZ2 278 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RNF121Q9H920 327 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 C6orf50Q9HD87 102 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 EXOSC4Q9NPD3 245 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SMYD2Q9NRG4 433 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 COA4Q9NYJ1 87 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ABCD2Q9UBJ2 740 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 MORF4L1Q9UBU8 362 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TRHDEQ9UKU6 1024 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 LYVE1Q9Y5Y7 322 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 A0A1B0GTQ1 180 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TCRBV7S3A2A0A539 114 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TCRBV3S1A0A5B6 114 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TRABD2BA6NFA1 517 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 USP17L10C9JJH3 530 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 SCAMP2O15127 329 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 HPGDSO60760 199 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ULK1O75385 1050 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 LRIG2O94898 1065 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 ADH1CP00326 375 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 RLN2P04090 185 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 LTA4HP09960 611 aaKnown RBP6.74□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM11P17152 192 aa6.74□□□□□ -1.33
VPS13B-205ENST00000493587 HDCP19113 662 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms