RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	C1orf189	Q5VU69	101 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	MLIP	Q5VWP3	458 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	KAZN	Q674X7	775 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	PID1	Q7Z2X4	250 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	TRIM73	Q86UV7	250 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	RAB43	Q86YS6	212 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	TICAM1	Q8IUC6	712 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	SRRM1	Q8IYB3	904 aa	Known RBP	13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR4K2	Q8NGD2	314 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	HAUS1	Q96CS2	278 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	LINC00615	Q96LM1	132 aa	Predicted RBP	13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	C5orf34	Q96MH7	638 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	SPRTN	Q9H040	489 aa	Predicted RBP	13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	DEF6	Q9H4E7	631 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	FAM96A	Q9H5X1	160 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	ZNF552	Q9H707	407 aa	Predicted RBP	13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	ASB8	Q9H765	288 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	FAM60A	Q9NP50	221 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	LCMT1	Q9UIC8	334 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	SERTAD3	Q9UJW9	196 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	CSAG2	Q9Y5P2	127 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	PIKFYVE	Q9Y2I7	2098 aa		13.27	□□□□□ -0.29
SAMM50-204	ENST00000493161	CCDC66	A2RUB6	948 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161		E7EQ34	232 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161		H3BMH7	237 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	CST8	O60676	142 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	SRP72	O76094	671 aa	Known RBP	13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	MSL3P1	P0C860	447 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	NDUFS1	P28331	727 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	PDHA2	P29803	388 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	NR2C2	P49116	596 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	XIAP	P98170	497 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	SLC9A5	Q14940	896 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	ZIC1	Q15915	447 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	TAZ	Q16635	292 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	DEFB110	Q30KQ9	67 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	ZNF658B	Q4V348	819 aa	Predicted RBP	13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	ZRANB3	Q5FWF4	1079 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	DCAF10	Q5QP82	559 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	CROCC	Q5TZA2	2017 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	LRRC38	Q5VT99	294 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	CUZD1	Q86UP6	607 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	ADGRF3	Q8IZF5	1079 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	GALNT16	Q8N428	558 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR52E1	Q8NGJ3	308 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR13C4	Q8NGS5	318 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	RBM41	Q96IZ5	413 aa	Known RBP	13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	BARD1	Q99728	777 aa	Known RBP	13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	APOL2	Q9BQE5	337 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	FICD	Q9BVA6	458 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	SLC7A5P2	Q9GIP4	190 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	OR52A5	Q9H2C5	316 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	SYTL2	Q9HCH5	934 aa		13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	PTRH2	Q9Y3E5	179 aa	Known RBP	13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	TEP1	Q99973	2627 aa	Known RBP	13.26	□□□□□ -0.29
SAMM50-204	ENST00000493161	FER1L5	A0AVI2	2057 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161		C9J4A7	227 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	GOLGA6L22	H0YM25	854 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	CCL22	O00626	93 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	PRF1	P14222	555 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	AGXT	P21549	392 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	TNFRSF8	P28908	595 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	ARHGAP25	P42331	645 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	GLRB	P48167	497 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	GABRA4	P48169	554 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	PRLHR	P49683	370 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	CDKN1C	P49918	316 aa	Predicted RBP	13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	TMPRSS15	P98073	1019 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	PRKG2	Q13237	762 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	MPP3	Q13368	585 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	SSPN	Q14714	243 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	MYBPC3	Q14896	1274 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	CAVIN1	Q6NZI2	390 aa	Known RBP	13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	IGFL3	Q6UXB1	125 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	HM13	Q8TCT9	377 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	DPH2	Q9BQC3	489 aa	Predicted RBP	13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	CCM2	Q9BSQ5	444 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	TFB2M	Q9H5Q4	396 aa	Known RBP	13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	SPTLC3	Q9NUV7	552 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	P4HTM	Q9NXG6	502 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	IFNK	Q9P0W0	207 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	DHCR7	Q9UBM7	475 aa	Known RBP	13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	RSPH14	Q9UHP6	348 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	CDYL	Q9Y232	598 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	PCDHGA10	Q9Y5H3	936 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	HEBP2	Q9Y5Z4	205 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	COPG1	Q9Y678	874 aa	Known RBP	13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	CCDC88C	Q9P219	2028 aa		13.25	□□□□□ -0.29
SAMM50-204	ENST00000493161	AGAP14	A8MT82	685 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	MATN2	O00339	956 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	ALOX12B	O75342	701 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	UMOD	P07911	640 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	COMT	P21964	271 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	HADHA	P40939	763 aa		13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	TNNT3	P45378	269 aa	Predicted RBP	13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	MSLN	Q13421	630 aa	Predicted RBP	13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	TAF1A	Q15573	450 aa	Predicted RBP	13.24	□□□□□ -0.29
SAMM50-204	ENST00000493161	ODF2	Q5BJF6	829 aa		13.24	□□□□□ -0.29

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