RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 EPB42P16452 691 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 CYP2A7P20853 494 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 BMP8BP34820 402 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 TNFRSF4P43489 277 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 MAPK9P45984 424 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 MTTPP55157 894 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 AP1S2P56377 157 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 TRAF3Q13114 568 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 GRB7Q14451 532 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 C1orf146Q5VVC0 180 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 FAM219BQ5XKK7 198 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 RIPOR1Q6ZS17 1223 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 GK5Q6ZS86 529 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 RNF165Q6ZSG1 346 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 RASGRP3Q8IV61 690 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 VRK3Q8IV63 474 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 MIER2Q8N344 545 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 OR4F6Q8NGB9 312 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 MCOLN3Q8TDD5 553 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 SKA2Q8WVK7 121 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 ABHD8Q96I13 439 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 ACOX2Q99424 681 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 ZCCHC2Q9C0B9 1178 aaKnown RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 SDR39U1Q9NRG7 319 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 CACNA2D2Q9NY47 1150 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 CCDC167Q9P0B6 97 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 CNOT6Q9ULM6 557 aaKnown RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 STON1Q9Y6Q2 735 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 LRRK1Q38SD2 2015 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 CEP290O15078 2479 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 MMP20O60882 483 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 KATNA1O75449 491 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 MATN4O95460 622 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 SOD1P00441 154 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 CAPN1P07384 714 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 EBLN1P0CF75 366 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 ARL1P40616 181 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 P2RY2P41231 377 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 PSMD8P48556 350 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 KIF19Q2TAC6 998 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 ZNF648Q5T619 568 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 LRRC70Q7Z2Q7 622 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 CXorf40AQ8TE69 158 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 GLMNQ92990 594 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 CDK15Q96Q40 435 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 RPP25Q9BUL9 199 aaKnown RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 SLC32A1Q9H598 525 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 WDR41Q9HAD4 459 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 TMEM45AQ9NWC5 275 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 NKX1-2Q9UD57 310 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 COQ6Q9Y2Z9 468 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 L3MBTL1Q9Y468 752 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 FADS3Q9Y5Q0 445 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 BBIP1A8MTZ0 92 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 PLK4O00444 970 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 INPP4BO15327 924 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 TSPAN6O43657 245 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 RNASEH1O60930 286 aaKnown RBP13.74□□□□□ -0.21
PTPN7-216ENST00000492977 TBX10O75333 385 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 PSMG1O95456 288 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 HMOX2P30519 316 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 GDF5P43026 501 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 GPR1P46091 355 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 CTSCP53634 463 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 ERVK-8P63133 956 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 DLX2Q07687 328 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-216ENST00000492977 CAMK2GQ13555 558 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-216ENST00000492977 RPS6KA2Q15349 733 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 SKIV2LQ15477 1246 aaKnown RBP13.74□□□□□ -0.21
PTPN7-216ENST00000492977 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 BCL7AQ4VC05 210 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 SYTL3Q4VX76 610 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 C6orf132Q5T0Z8 1188 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 TMEM220Q6QAJ8 160 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 BNC2Q6ZN30 1099 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-216ENST00000492977 TDHQ8IZJ6 230 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-216ENST00000492977 TSPEARQ8WU66 669 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 TMEM159Q96B96 161 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 RSPH9Q9H1X1 276 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-216ENST00000492977 NOP53Q9NZM5 478 aaKnown RBP13.74□□□□□ -0.21
PTPN7-216ENST00000492977 EPS15L1Q9UBC2 864 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 TRPS1Q9UHF7 1281 aa13.74□□□□□ -0.21
PTPN7-216ENST00000492977 SLC5A10A0PJK1 596 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 CCDC85CA6NKD9 419 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 AP1G1O43747 822 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 NRP2O60462 931 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 WDR47O94967 919 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 ADH1BP00325 375 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 GSTM1P09488 218 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 GALK1P51570 392 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 CCR3P51677 355 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 GSTM4Q03013 218 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 CNTN1Q12860 1018 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 LRP8Q14114 963 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 ATP6AP1LQ52LC2 224 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 PIP5KL1Q5T9C9 394 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 RAET1GQ6H3X3 334 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 PAOXQ6QHF9 649 aa13.73□□□□□ -0.21
PTPN7-216ENST00000492977 IL27RAQ6UWB1 636 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms