RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 NEK10Q6ZWH5 1172 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 ZNF771Q7L3S4 317 aaPredicted RBP7.87□□□□□ -1.15
FDPS-218ENST00000492887 SPATA21Q7Z572 469 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 VRK3Q8IV63 474 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 WDR75Q8IWA0 830 aaKnown RBP7.87□□□□□ -1.15
FDPS-218ENST00000492887 TMEFF1Q8IYR6 380 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 CACNA2D3Q8IZS8 1091 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 LILRA3Q8N6C8 439 aaPredicted RBP7.87□□□□□ -1.15
FDPS-218ENST00000492887 ANKS4BQ8N8V4 417 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 SNX31Q8N9S9 440 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 OR13H1Q8NG92 308 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 MCOLN3Q8TDD5 553 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 GRAMD1AQ96CP6 724 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 KLHDC7BQ96G42 594 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 PDXPQ96GD0 296 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 CCT8L2Q96SF2 557 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 GATA5Q9BWX5 397 aaPredicted RBP7.87□□□□□ -1.15
FDPS-218ENST00000492887 TRIM55Q9BYV6 548 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 WWP1Q9H0M0 922 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 TM7SF3Q9NS93 570 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 THAP1Q9NVV9 213 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 SIRPGQ9P1W8 387 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 CIDEBQ9UHD4 219 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 EIF2B4Q9UI10 523 aaKnown RBP7.87□□□□□ -1.15
FDPS-218ENST00000492887 MBD1Q9UIS9 605 aaPredicted RBP7.87□□□□□ -1.15
FDPS-218ENST00000492887 ADAMTS6Q9UKP5 1117 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 IKZF3Q9UKT9 509 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 ASF1AQ9Y294 204 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 TDRKHQ9Y2W6 561 aaKnown RBP7.87□□□□□ -1.15
FDPS-218ENST00000492887 HS3ST3A1Q9Y663 406 aa7.87□□□□□ -1.15
FDPS-218ENST00000492887 GOLGA4Q13439 2230 aaKnown RBP7.87□□□□□ -1.15
FDPS-218ENST00000492887 SDK1Q7Z5N4 2213 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ATXN2Q99700 1313 aaKnown RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 C17orf113A0A1B0GUU1 675 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SLC5A10A0PJK1 596 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 CCDC189A1A4V9 331 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ERICH4A6NGS2 130 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 TOR1BO14657 336 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 KLF11O14901 512 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 CHUKO15111 745 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SLC16A5O15375 505 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 PI15O43692 258 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ITM2AO43736 263 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 NPHS1O60500 1241 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 LILRB5O75023 590 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 GPC4O75487 556 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SIX3O95343 332 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 RPN2P04844 631 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 IGHV4-34P06331 123 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ENO2P09104 434 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 CTSEP14091 401 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 TSPAN8P19075 237 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 BCKDHBP21953 392 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 IDSP22304 550 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 MPSTP25325 297 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 MAOBP27338 520 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 RPL10P27635 214 aaKnown RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 PDHA2P29803 388 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 TRIM23P36406 574 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ACTR1BP42025 376 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 HALP42357 657 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 CCR10P46092 362 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 DHPSP49366 369 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 PPM1FP49593 454 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 CLCNKAP51800 687 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ALDH18A1P54886 795 aaKnown RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 C21orf59P57076 290 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 DNAJB13P59910 316 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SRP54P61011 504 aaKnown RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 ACTR1AP61163 376 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 NFKB2Q00653 900 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 CSTF1Q05048 431 aaKnown RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 DMWDQ09019 674 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SETDB1Q15047 1291 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ZNF678Q5SXM1 525 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SULT1C3Q6IMI6 304 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SBSNQ6UWP8 590 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 MBOAT1Q6ZNC8 495 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 RGS9BPQ6ZS82 235 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 CEP68Q76N32 757 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 LPCAT2Q7L5N7 544 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 TRIM48Q8IWZ4 208 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 PHACTR4Q8IZ21 702 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 SLC22A15Q8IZD6 547 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 TCAIMQ8N3R3 496 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 RAB42Q8N4Z0 105 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 CCDC197Q8NCU1 140 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 MAGEC3Q8TD91 643 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 OR1E3Q8WZA6 343 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 TSACCQ96A04 125 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 ESAMQ96AP7 390 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 MOCOSQ96EN8 888 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 MED8Q96G25 268 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 PDLIM5Q96HC4 596 aaKnown RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 LINC00615Q96LM1 132 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 C12orf66Q96MD2 445 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 ZNF317Q96PQ6 595 aaPredicted RBP7.86□□□□□ -1.15
FDPS-218ENST00000492887 FERD3LQ96RJ6 166 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 TIMM29Q9BSF4 260 aa7.86□□□□□ -1.15
FDPS-218ENST00000492887 HGH1Q9BTY7 390 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms