RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CDKL2Q92772 493 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 RHOXF2Q9BQY4 288 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 AARSD1Q9BTE6 412 aaKnown RBP13.62□□□□□ -0.23
CCM2-217ENST00000492883 FAM129AQ9BZQ8 928 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 TSPYL1Q9H0U9 437 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 TRIT1Q9H3H1 467 aaKnown RBP13.62□□□□□ -0.23
CCM2-217ENST00000492883 KIR3DX1Q9H7L2 352 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 L2HGDHQ9H9P8 463 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 SLC17A6Q9P2U8 582 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 SLC24A2Q9UI40 661 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 CDYLQ9Y232 598 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 AK5Q9Y6K8 562 aa13.62□□□□□ -0.23
CCM2-217ENST00000492883 ZNF106Q9H2Y7 1883 aaKnown RBP13.61□□□□□ -0.23
CCM2-217ENST00000492883 MYLKQ15746 1914 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 IGHV5-10-1A0A0J9YXX1 117 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 A8MU76 341 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 AGRPO00253 132 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 VPS26AO75436 327 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 GSTA2P09210 222 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 GABRB3P28472 473 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 CCKBRP32239 447 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 CSF2RBP32927 897 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 PDX1P52945 283 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 LIMK2P53671 638 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 CAMK2BQ13554 666 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 TTLL9Q3SXZ7 439 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 ARMC6Q6NXE6 501 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 FOXR1Q6PIV2 292 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 GALNT7Q86SF2 657 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 TBC1D21Q8IYX1 336 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 SIDT2Q8NBJ9 832 aaKnown RBP13.61□□□□□ -0.23
CCM2-217ENST00000492883 OR4E2Q8NGC2 313 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 OR5AR1Q8NGP9 310 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 LCN9Q8WX39 176 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 KCNJ9Q92806 393 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 FOPNLQ96NB1 174 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 NDNQ99608 321 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 HGH1Q9BTY7 390 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 NRSN2Q9GZP1 204 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 LATS2Q9NRM7 1088 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 HRASLS2Q9NWW9 162 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 NSMCE4AQ9NXX6 385 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 OGFRQ9NZT2 677 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 AKAP7Q9P0M2 348 aaPredicted RBP13.61□□□□□ -0.23
CCM2-217ENST00000492883 TMEM9Q9P0T7 183 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 GALPQ9UBC7 116 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 KLHL3Q9UH77 587 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 POLG2Q9UHN1 485 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 TSR3Q9UJK0 312 aaKnown RBP13.61□□□□□ -0.23
CCM2-217ENST00000492883 TDRKHQ9Y2W6 561 aaKnown RBP13.61□□□□□ -0.23
CCM2-217ENST00000492883 WDR87Q6ZQQ6 2873 aa13.61□□□□□ -0.23
CCM2-217ENST00000492883 CCDC187A0A096LP49 1063 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 TCRBV9S1A1TA0A576 114 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 CAPN5O15484 640 aaPredicted RBP13.6□□□□□ -0.23
CCM2-217ENST00000492883 KDM1AO60341 852 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 RPN2P04844 631 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 MPOP05164 745 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 ABCG1P45844 678 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 CLCN7P51798 805 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 PRKAA1Q13131 559 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 TRA2AQ13595 282 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCM2-217ENST00000492883 CUL1Q13616 776 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 ACSBG2Q5FVE4 666 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 C3orf38Q5JPI3 329 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 UGT3A1Q6NUS8 523 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 IRGCQ6NXR0 463 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 TTC23LQ6PF05 361 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 RAB11FIP2Q7L804 512 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 STRA8Q7Z7C7 330 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 OOSP2Q86WS3 158 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 SLITRK4Q8IW52 837 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 GPATCH11Q8N954 259 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 RCBTB1Q8NDN9 531 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 OR52E1Q8NGJ3 308 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 OR5K2Q8NHB8 316 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 WDR36Q8NI36 951 aaKnown RBP13.6□□□□□ -0.23
CCM2-217ENST00000492883 RSC1A1Q92681 617 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 INPP5DQ92835 1189 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 ZDHHC12Q96GR4 267 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 CCDC74BQ96LY2 380 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 TGM7Q96PF1 710 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 FMO2Q99518 471 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 GPR21Q99679 349 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 CMKLR1Q99788 373 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 SRMSQ9H3Y6 488 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 LRRC4CQ9HCJ2 640 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 TAS2R13Q9NYV9 303 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 TXNDC16Q9P2K2 825 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 KLHL42Q9P2K6 505 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 SATB2Q9UPW6 733 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 DHRS7Q9Y394 339 aa13.6□□□□□ -0.23
CCM2-217ENST00000492883 ARID1BQ8NFD5 2236 aaPredicted RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 OR6C74A6NCV1 312 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 SPAG6O75602 509 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 PIAS1O75925 651 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 DEKP35659 375 aaKnown RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 SKIV2L2P42285 1042 aaKnown RBP13.59□□□□□ -0.23
CCM2-217ENST00000492883 CAPZBP47756 277 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 GPX6P59796 221 aa13.59□□□□□ -0.23
CCM2-217ENST00000492883 GABREP78334 506 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms