RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PRDX3P30048 256 aaKnown RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 PPARGP37231 505 aaPredicted RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 PREPP48147 710 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 KPNA2P52292 529 aaKnown RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 KLF1Q13351 362 aaPredicted RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 OLIG2Q13516 323 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 SEMA5AQ13591 1074 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 UGT8Q16880 541 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 CERS6Q6ZMG9 384 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 ZNF517Q6ZMY9 492 aaPredicted RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 AMIGO1Q86WK6 493 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 TFGQ92734 400 aaPredicted RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 MR1Q95460 341 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 FAM118BQ9BPY3 351 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 C17orf62Q9BQA9 187 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 EPN3Q9H201 632 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 OR52A5Q9H2C5 316 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 POLG2Q9UHN1 485 aa12.11□□□□□ -0.47
COL6A1-205ENST00000492851 G3BP2Q9UN86 482 aaKnown RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 SETXQ7Z333 2677 aaKnown RBP12.11□□□□□ -0.47
COL6A1-205ENST00000492851 MROH6A6NGR9 719 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 SLC9B1P1A6NJY1 282 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 GOLGA6L6A8MZA4 724 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 MEN1O00255 615 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 TIAF1O95411 115 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 CD63P08962 238 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 OR56A5P0C7T3 313 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 AGXTP21549 392 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 PSMA3P25788 255 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 CDH17Q12864 832 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 POU6F1Q14863 301 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 GPR19Q15760 415 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 ATP1A1-AS1Q5TC04 95 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 AADACL2Q6P093 401 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 DUS1LQ6P1R4 473 aaKnown RBP12.1□□□□□ -0.47
COL6A1-205ENST00000492851 ASB18Q6ZVZ8 466 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 NLRP9Q7RTR0 991 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 DNAAF3Q8N9W5 541 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 ACRBPQ8NEB7 543 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 SLC35B2Q8TB61 432 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 CLIP3Q96DZ5 547 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 HES6Q96HZ4 224 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 TSSK1BQ9BXA7 367 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 SLC7A5P2Q9GIP4 190 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 RBSNQ9H1K0 784 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 TLK1Q9UKI8 766 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 RIMKLBQ9ULI2 386 aa12.1□□□□□ -0.47
COL6A1-205ENST00000492851 FLNBO75369 2602 aaKnown RBP12.1□□□□□ -0.47
COL6A1-205ENST00000492851 HEATR9A2RTY3 570 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 FURINP09958 794 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 TPH1P17752 444 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 CYP2A7P20853 494 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
COL6A1-205ENST00000492851 SHMT2P34897 504 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 FDFT1P37268 417 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 LMAN1P49257 510 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 FOXK1P85037 733 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 BOP1Q14137 746 aaKnown RBP12.09□□□□□ -0.47
COL6A1-205ENST00000492851 FAM199XQ6PEV8 388 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-205ENST00000492851 PACS1Q6VY07 963 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 ATCAYQ86WG3 371 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 HPS6Q86YV9 775 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 TBC1D21Q8IYX1 336 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 GPR135Q8IZ08 494 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 DSELQ8IZU8 1212 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 LILRA3Q8N6C8 439 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-205ENST00000492851 CLDN19Q8N6F1 224 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 OR52E1Q8NGJ3 308 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 N4BP2L2Q92802 583 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-205ENST00000492851 PEX13Q92968 403 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 TCTN2Q96GX1 697 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 TMEM121Q9BTD3 319 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 NLNQ9BYT8 704 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 PITPNM3Q9BZ71 974 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 TSGA10Q9BZW7 698 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 CHRNA10Q9GZZ6 450 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 OR6C2Q9NZP2 312 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 SNX7Q9UNH6 387 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 TP53TG5Q9Y2B4 290 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 PCDHGB7Q9Y5F8 929 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 AP1M2Q9Y6Q5 423 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 BOD1L1Q8NFC6 3051 aa12.09□□□□□ -0.47
COL6A1-205ENST00000492851 E7EQ34 232 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 E7EVH7 732 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 AP3B1O00203 1094 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 BTN3A3O00478 584 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 CCL22O00626 93 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 DDX3YO15523 660 aaKnown RBP12.08□□□□□ -0.48
COL6A1-205ENST00000492851 ADRA1DP25100 572 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 CDKN1CP49918 316 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-205ENST00000492851 ITGA1P56199 1179 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 DBN1Q16643 649 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 ZNF658BQ4V348 819 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-205ENST00000492851 PLEKHS1Q5SXH7 462 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 SEL1L2Q5TEA6 688 aa12.08□□□□□ -0.48
COL6A1-205ENST00000492851 PHC3Q8NDX5 983 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms