RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 IRGCQ6NXR0 463 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 ZNF572Q7Z3I7 529 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 MAATS1Q7Z4T9 603 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 SLC22A15Q8IZD6 547 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 CARFQ8N187 725 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 AGGF1Q8N302 714 aaeCLIP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 BMPERQ8N8U9 685 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 BBOF1Q8ND07 529 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 OR5K2Q8NHB8 316 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 GABPB2Q8TAK5 448 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 KCNE4Q8WWG9 221 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 TFGQ92734 400 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 LRRC39Q96DD0 335 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 C16orf45Q96MC5 204 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 TGM7Q96PF1 710 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 TEFMQ96QE5 360 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 TAAR9Q96RI9 348 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 FERD3LQ96RJ6 166 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 EBNA1BP2Q99848 306 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 TRIM56Q9BRZ2 755 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 FAM167BQ9BTA0 163 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 DDA1Q9BW61 102 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 ASPSCR1Q9BZE9 553 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 DPH1Q9BZG8 443 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 TRIT1Q9H3H1 467 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 ZNF768Q9H5H4 540 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 TFB2MQ9H5Q4 396 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 SEMA5BQ9P283 1151 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 POLG2Q9UHN1 485 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 FAM169AQ9Y6X4 670 aa10.38□□□□□ -0.75
CDC42SE1-206ENST00000492796 TLCD2A6NGC4 264 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 IQCF5A8MTL0 148 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 C9orf172C9J069 976 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 BHMG1C9JSJ3 638 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 PRAMEF10O60809 474 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 GPC4O75487 556 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 RASSF9O75901 435 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 APC2O95996 2303 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 TUBB4AP04350 444 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 RPN2P04844 631 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 FGF3P11487 239 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 CCL4P13236 92 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 AOAHP28039 575 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 ACADLP28330 430 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 LEPRP48357 1165 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 ITGA8P53708 1063 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 ARL4CP56559 192 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 CKAP4Q07065 602 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 HSPA14Q0VDF9 509 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 PRKAA1Q13131 559 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 CRYMQ14894 314 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 BRD3Q15059 726 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 HIF1AQ16665 826 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 SPANXN3Q5MJ09 141 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 CTSL3PQ5NE16 218 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 DNTTIP2Q5QJE6 756 aaKnown RBP10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 PLEKHS1Q5SXH7 462 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 DCAF12Q5T6F0 453 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 ARMC6Q6NXE6 501 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 CYB5D1Q6P9G0 228 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 CENPUQ71F23 418 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 OTOAQ7RTW8 1153 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 KCNMB4Q86W47 210 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 FAM129CQ86XR2 697 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 KMT5CQ86Y97 462 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 TBC1D21Q8IYX1 336 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 KRT222Q8N1A0 295 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 OR52E1Q8NGJ3 308 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 LKAAEAR1Q8TD35 194 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 LCN9Q8WX39 176 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 JPH3Q8WXH2 748 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 UBXN4Q92575 508 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 USP7Q93009 1102 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 BIRC8Q96P09 236 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 ZPBPQ9BS86 351 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 C20orf96Q9NUD7 363 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 HRASLS2Q9NWW9 162 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 OCIAD1Q9NX40 245 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 CDYLQ9Y232 598 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 ASF1AQ9Y294 204 aa10.37□□□□□ -0.75
CDC42SE1-206ENST00000492796 FREM2Q5SZK8 3169 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 OR6C74A6NCV1 312 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 KIF2AO00139 706 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 AGRPO00253 132 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 SLCO2B1O94956 709 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 LIPCP11150 499 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 PKMP14618 531 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 ITGB6P18564 788 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 ATP5DP30049 168 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 FMO4P31512 558 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 SHMT2P34897 504 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 SLC1A2P43004 574 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 UCNP55089 124 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 MC2RQ01718 297 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 C2orf54Q08AI8 447 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 CALCOCO2Q13137 446 aa10.36□□□□□ -0.75
CDC42SE1-206ENST00000492796 BBS9Q3SYG4 887 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms