RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ANKRD28O15084 1053 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 IGSF6O95976 241 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 CCL5P13501 91 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 IL10P22301 178 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 ITPKAP23677 461 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 PSMA3P25788 255 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 CCR7P32248 378 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 SPAM1P38567 509 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 CCT8P50990 548 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 PDCD4Q53EL6 469 aaKnown RBP12.21□□□□□ -0.46
HMGN1-220ENST00000492280 GLYATQ6IB77 296 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 RGL4Q8IZJ4 473 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 NXPE1Q8N323 547 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 OR2AP1Q8NGE2 309 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 OR10A6Q8NH74 314 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 ULK4Q96C45 1275 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 RHBDF1Q96CC6 855 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 YME1L1Q96TA2 773 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 MRPS26Q9BYN8 205 aaKnown RBP12.21□□□□□ -0.46
HMGN1-220ENST00000492280 ATG10Q9H0Y0 220 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 ATP13A3Q9H7F0 1226 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 MRGBPQ9NV56 204 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 ARMC1Q9NVT9 282 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 LSM7Q9UK45 103 aaKnown RBP12.21□□□□□ -0.46
HMGN1-220ENST00000492280 PTBP2Q9UKA9 531 aaKnown RBP12.21□□□□□ -0.46
HMGN1-220ENST00000492280 B4GAT1O43505 415 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 VPS4BO75351 444 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 SEC22BO75396 215 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 C8AP07357 584 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TCF3P15923 654 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 RGS4P49798 205 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 MAPK10P53779 464 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 MTA1Q13330 715 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PCBP2Q15366 365 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PABPC1LQ4VXU2 614 aaKnown RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PRMT9Q6P2P2 845 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 ENPP6Q6UWR7 440 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 ZBTB46Q86UZ6 589 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TCEAL8Q8IYN2 117 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TRIML2Q8N7C3 387 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 CYB5D2Q8WUJ1 264 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 RMND5BQ96G75 393 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TSSK3Q96PN8 268 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 RBM38Q9H0Z9 239 aaKnown RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PRM3Q9NNZ6 103 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 ARL15Q9NXU5 204 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 SPG21Q9NZD8 308 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 ANAPC2Q9UJX6 822 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 DLGAP4Q9Y2H0 992 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 ST14Q9Y5Y6 855 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 OR2AG2A6NM03 316 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 AQP12BA6NM10 295 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 CLGNO14967 610 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 ACOX3O15254 700 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 OTCP00480 354 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 BMP2P12643 396 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TACR1P25103 407 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 SERPINA4P29622 427 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 AKT1P31749 480 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 HSPA13P48723 471 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TXNL4AP83876 142 aaKnown RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PTSQ03393 145 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 BNIP2Q12982 314 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 NKG7Q16617 165 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 IMPG1Q17R60 797 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 GPRC6AQ5T6X5 926 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PPP4R4Q6NUP7 873 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 GALNT10Q86SR1 603 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TMC8Q8IU68 726 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 AQP12AQ8IXF9 295 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 LILRA3Q8N6C8 439 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 ANKFN1Q8N957 763 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PDPRQ8NCN5 879 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 CDC26Q8NHZ8 85 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 EGLN2Q96KS0 407 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 CGREF1Q99674 301 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 THUMPD3Q9BV44 507 aaKnown RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 BBS2Q9BXC9 721 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 CFHR5Q9BXR6 569 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 LINC00597Q9H2U6 94 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PAK6Q9NQU5 681 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 B4GALT6Q9UBX8 382 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TMPRSS11EQ9UL52 423 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 CCL27Q9Y4X3 112 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 PCDHB1Q9Y5F3 818 aa12.2□□□□□ -0.46
HMGN1-220ENST00000492280 TMEM202A6NGA9 273 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 OLFM2O95897 454 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 LRG1P02750 347 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 EPORP19235 508 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 VARSP26640 1264 aaKnown RBP12.19□□□□□ -0.46
HMGN1-220ENST00000492280 RFC2P35250 354 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ADARP55265 1226 aaKnown RBP12.19□□□□□ -0.46
HMGN1-220ENST00000492280 NTHL1P78549 312 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ZNF697Q5TEC3 545 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 C22orf39Q6P5X5 142 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 TFAP2CQ92754 450 aa12.19□□□□□ -0.46
HMGN1-220ENST00000492280 ZUFSPQ96AP4 578 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms