RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 GSAPA4D1B5 854 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 ZNF487B1APH4 448 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 ZG16O60844 167 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 ALOX12BO75342 701 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 SERPING1P05155 500 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 NFKB1P19838 968 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 HADHAP40939 763 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 ADCY2Q08462 1091 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 PDK1Q15118 436 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 PRKD1Q15139 912 aaPredicted RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 ZRSR2Q15696 482 aaKnown RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 SLC1A5Q15758 541 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 HIF1AQ16665 826 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 BCL7AQ4VC05 210 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 C1orf189Q5VU69 101 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 MLIPQ5VWP3 458 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 LYPLAL1Q5VWZ2 237 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 SP5Q6BEB4 398 aaPredicted RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 MRPL14Q6P1L8 145 aaKnown RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 GLT6D1Q7Z4J2 308 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 ADGRF3Q8IZF5 1079 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 BLOC1S5Q8TDH9 187 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 SYN2Q92777 582 aaPredicted RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 LINC00615Q96LM1 132 aaPredicted RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 GBP5Q96PP8 586 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 SRPK1Q96SB4 655 aaKnown RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 DPH2Q9BQC3 489 aaPredicted RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 DHRS4Q9BTZ2 278 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 SPRTNQ9H040 489 aaPredicted RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 SYTL2Q9HCH5 934 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 SLC22A11Q9NSA0 550 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 CTTNBP2NLQ9P2B4 639 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 FAM153AQ9UHL3 310 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 CDYLQ9Y232 598 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 PTRH2Q9Y3E5 179 aaKnown RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 BZW2Q9Y6E2 419 aaKnown RBP12.8□□□□□ -0.36
USF1-206ENST00000491629 CPAMD8Q8IZJ3 1885 aa12.8□□□□□ -0.36
USF1-206ENST00000491629 A0A1W2PQJ5 194 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 C9J4A7 227 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 E7EQ34 232 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 APOL1O14791 398 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 HNRNPRO43390 633 aaKnown RBP12.79□□□□□ -0.36
USF1-206ENST00000491629 SLC35G4P0C7Q5 338 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 ATXN8OSP0DMR3 200 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 MSH3P20585 1137 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 AKT1P31749 480 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 XIAPP98170 497 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 ITGA9Q13797 1035 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 ELOAQ14241 798 aaKnown RBP12.79□□□□□ -0.36
USF1-206ENST00000491629 GSE1Q14687 1217 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 SLC9A5Q14940 896 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 NFKBIBQ15653 356 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 LONRF2Q1L5Z9 754 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 DEFB110Q30KQ9 67 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 ZDHHC20Q5W0Z9 365 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 CCDC70Q6NSX1 233 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 TRIM73Q86UV7 250 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 CFAP206Q8IYR0 622 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 CLEC1AQ8NC01 280 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 PHC3Q8NDX5 983 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 ACVR1CQ8NER5 493 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 OR52E1Q8NGJ3 308 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 OR2Y1Q8NGV0 311 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 ZNF398Q8TD17 642 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 LCN9Q8WX39 176 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 FER1L6-AS2Q96M78 137 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 GORASP1Q9BQQ3 440 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 OR52A5Q9H2C5 316 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 SRMSQ9H3Y6 488 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 XKR8Q9H6D3 395 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.79□□□□□ -0.36
USF1-206ENST00000491629 SERTAD3Q9UJW9 196 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 NOVA2Q9UNW9 492 aaKnown RBP12.79□□□□□ -0.36
USF1-206ENST00000491629 OSGIN2Q9Y236 505 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 ARL5AQ9Y689 179 aa12.79□□□□□ -0.36
USF1-206ENST00000491629 NCOA6Q14686 2063 aaPredicted RBP12.79□□□□□ -0.36
USF1-206ENST00000491629 AGAP14A8MT82 685 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 PPP1R12AO14974 1030 aaPredicted RBP12.78□□□□□ -0.36
USF1-206ENST00000491629 PRAMEF1O95521 474 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 EPOP01588 193 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 PECAM1P16284 738 aaPredicted RBP12.78□□□□□ -0.36
USF1-206ENST00000491629 ITGAXP20702 1163 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 NDUFS1P28331 727 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 PDHA2P29803 388 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 RIPPLY3P57055 190 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 DYNLT1P63172 113 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 PRKAA1Q13131 559 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 OLIG2Q13516 323 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 FILIP1LQ4L180 1135 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 RHBDD2Q6NTF9 364 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 IGFL2Q6UWQ7 119 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 VSIG1Q86XK7 387 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 MCEMP1Q8IX19 187 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 ZADH2Q8N4Q0 377 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 FLVCR1-AS1Q8TAF5 88 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 GRHL3Q8TE85 626 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 CPLX3Q8WVH0 158 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 IP6K3Q96PC2 410 aa12.78□□□□□ -0.36
USF1-206ENST00000491629 BPIFA3Q9BQP9 254 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms