RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 LHX1P48742 406 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 POLD2P49005 469 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 CDKN1CP49918 316 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 GP2P55259 537 aaKnown RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 TBX4P57082 545 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 RAB25P57735 213 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 HIST2H2ACQ16777 129 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 DOK6Q6PKX4 331 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 Q6ZPB1 254 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 LRRC49Q8IUZ0 686 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 OR6Q1Q8NGQ2 317 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 RNF167Q9H6Y7 350 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 MALT1Q9UDY8 824 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 PCDHB14Q9Y5E9 798 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 PCDHGC4Q9Y5F7 938 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 ACTL7AQ9Y615 435 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 PTPRFP10586 1907 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 SLC7A4O43246 635 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 ONECUT3O60422 494 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 MAFKO60675 156 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 UGT2B11O75310 529 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 CREG1O75629 220 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 FYNP06241 537 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 ITIH1P19827 911 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 PPP5CP53041 499 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 XAF1Q6GPH4 301 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 PDE12Q6L8Q7 609 aaKnown RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 APOBEC3FQ8IUX4 373 aaKnown RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 NTAN1Q96AB6 310 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 SLC9A7Q96T83 725 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 CNPPD1Q9BV87 410 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 CINPQ9BW66 212 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 TDRD1Q9BXT4 1180 aaKnown RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 ZNF556Q9HAH1 456 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 TMEM161AQ9NX61 479 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 GPR45Q9Y5Y3 372 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 A0A096LPI6 279 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 IRF1P10914 325 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 GADD45AP24522 165 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 HTR1EP28566 365 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 C21orf33P30042 268 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 DCTP40126 519 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 IL12RB1P42701 662 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 SEMG2Q02383 582 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 CYP27C1Q4G0S4 372 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 RFTN2Q52LD8 501 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 INTS6LQ5JSJ4 861 aaKnown RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 OTUD1Q5VV17 481 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 STEAP3Q658P3 488 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 TCAIMQ8N3R3 496 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 CAMKK2Q96RR4 588 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 MUC13Q9H3R2 512 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 ELOVL6Q9H5J4 265 aa9.66□□□□□ -0.86
ERCC3-208ENST00000491292 INTS6Q9UL03 887 aaKnown RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 ZNF490Q9ULM2 529 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-208ENST00000491292 A0A1W2PQH9 124 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 ANKRD34BA5PLL1 514 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 RFXANKO14593 260 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 GPR39O43194 453 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 DYRK3O43781 588 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 SLC25A27O95847 323 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 ATP4BP51164 291 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 BEX3Q00994 111 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 GRSF1Q12849 480 aaKnown RBP eCLIP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 AGAP7PQ5VUJ5 663 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 PRR23CQ6ZRP0 262 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 MMAAQ8IVH4 418 aaKnown RBP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 SLC22A15Q8IZD6 547 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 TMEM132CQ8N3T6 1108 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 SELENOMQ8WWX9 145 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 PHF21AQ96BD5 680 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 NECTIN4Q96NY8 510 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 GFM1Q96RP9 751 aaKnown RBP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 POLR1EQ9GZS1 481 aaKnown RBP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 SATB2Q9UPW6 733 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 RGS14O43566 566 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 TMCC2O75069 709 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 JRKO75564 520 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 RPP40O75818 363 aaKnown RBP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 SNX4O95219 450 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 OPN1SWP03999 348 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 CTPS1P17812 591 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 HLA-DPA1P20036 260 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 HOXD11P31277 338 aaPredicted RBP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 MC4RP32245 332 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 CSTF3Q12996 717 aaKnown RBP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 UAP1L1Q3KQV9 507 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 RANBP10Q6VN20 620 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 VTCN1Q7Z7D3 282 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 ASCC1Q8N9N2 400 aaKnown RBP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 OR4F6Q8NGB9 312 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 OR6K2Q8NGY2 324 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 OTULINQ96BN8 352 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 SEPT5Q99719 369 aaPredicted RBP9.65□□□□□ -0.86
ERCC3-208ENST00000491292 EBPLQ9BY08 206 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 ALOXE3Q9BYJ1 711 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 SNTG1Q9NSN8 517 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 OPTCQ9UBM4 332 aa9.65□□□□□ -0.86
ERCC3-208ENST00000491292 FKBPLQ9UIM3 349 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms