RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 PRR23AA6NEV1 266 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 IQCF5A8MTL0 148 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 HMGB1P1B2RPK0 211 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 NEMP1O14524 444 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 INPP4BO15327 924 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 PHGDHO43175 533 aaKnown RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TYROBPO43914 113 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 DNAJC6O75061 913 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ATG13O75143 517 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 NIPSNAP2O75323 286 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 SPAG7O75391 227 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TM7SF2O76062 418 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 PCDH8O95206 1070 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 PAK4O96013 591 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 IGHV4-34P06331 123 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 SLC35E2BP0CK96 405 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TDGF1P13385 188 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 KRT15P19012 456 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 KRT4P19013 534 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ITGALP20701 1170 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 FDXRP22570 491 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 RPS3P23396 243 aaKnown RBP eCLIP4.79□□□□□ -1.647e-7■■■■■ 27.8
EPCAM-206ENST00000490733 NFKBIAP25963 317 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CNTFP26441 200 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 MAT2AP31153 395 aaKnown RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 FMO4P31512 558 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 SPRP35270 261 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CCNFP41002 786 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CD151P48509 253 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 PXNP49023 591 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TTPAP49638 278 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 SERPINB9P50453 376 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 HK2P52789 917 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 GYS2P54840 703 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ADARP55265 1226 aaKnown RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 RPS21P63220 83 aaKnown RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 IRF9Q00978 393 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CLCQ05315 142 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 SLC18A2Q05940 514 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 EGR3Q06889 387 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 DMWDQ09019 674 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 DLG1Q12959 904 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 PDE1CQ14123 709 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 IRF4Q15306 451 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ZNF124Q15973 351 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TTC31Q49AM3 519 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 GPR33Q49SQ1 333 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 GPRC6AQ5T6X5 926 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 HECTD2Q5U5R9 776 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ZDHHC20Q5W0Z9 365 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 MRNIPQ6NTE8 343 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CERS6Q6ZMG9 384 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TAS2R42Q7RTR8 314 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CLEC14AQ86T13 490 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CROCCP2Q86T23 111 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TRIM74Q86UV6 250 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 PIM3Q86V86 326 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 KBTBD6Q86V97 674 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 HORMAD1Q86X24 394 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 MAML2Q8IZL2 1156 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CENPLQ8N0S6 344 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CLDN19Q8N6F1 224 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 OTUD6BQ8N6M0 293 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 BANPQ8N9N5 519 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 DDHD1Q8NEL9 900 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TSTD1Q8NFU3 115 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CXorf40AQ8TE69 158 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 DENND1AQ8TEH3 1009 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 GANCQ8TET4 914 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ANKRD49Q8WVL7 239 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 BTN2A2Q8WVV5 523 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 RLN3Q8WXF3 142 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 GLYATL1Q969I3 302 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CENPTQ96BT3 561 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 FAM136AQ96C01 138 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 MTBPQ96DY7 904 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 NUS1Q96E22 293 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CCDC120Q96HB5 630 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 GPR78Q96P69 363 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 LENG8Q96PV6 779 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 VPS35Q96QK1 796 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ORAI3Q9BRQ5 295 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 AARSD1Q9BTE6 412 aaKnown RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ZSCAN5AQ9BUG6 496 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 LGR4Q9BXB1 951 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 SPATA16Q9BXB7 569 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 C1QTNF1Q9BXJ1 281 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 TPSD1Q9BZJ3 242 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CDH19Q9H159 772 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 ACBD3Q9H3P7 528 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 C6orf106Q9H6K1 298 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 PREBQ9HCU5 417 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 FZD3Q9NPG1 666 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 SNX15Q9NRS6 342 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 NSMCE4AQ9NXX6 385 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.79□□□□□ -1.64
EPCAM-206ENST00000490733 GULP1Q9UBP9 304 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 APPL1Q9UKG1 709 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 IKZF3Q9UKT9 509 aa4.79□□□□□ -1.64
EPCAM-206ENST00000490733 EMCNQ9ULC0 261 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms