RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TUBB4BP68371 445 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 TMPRSS15P98073 1019 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 NFKB2Q00653 900 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 SEMA5AQ13591 1074 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 DNASE1L3Q13609 305 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 TUBB2AQ13885 445 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 KRT33BQ14525 404 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 POU6F1Q14863 301 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 BCL7AQ4VC05 210 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 KHDC1Q4VXA5 237 aaKnown RBP10.11□□□□□ -0.79
TTC28-207ENST00000490475 CCDC137Q6PK04 289 aaKnown RBP10.11□□□□□ -0.79
TTC28-207ENST00000490475 FAM92BQ6ZTR7 304 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 APLFQ8IW19 511 aaPredicted RBP10.11□□□□□ -0.79
TTC28-207ENST00000490475 RASGEF1AQ8N9B8 481 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 TEX19Q8NA77 164 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 OR13C4Q8NGS5 318 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 KIF18AQ8NI77 898 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 CAPZA3Q96KX2 299 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 NAPGQ99747 312 aaPredicted RBP10.11□□□□□ -0.79
TTC28-207ENST00000490475 TUBB2BQ9BVA1 445 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 TRIM4Q9C037 500 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 KIR3DX1Q9H7L2 352 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 LHX9Q9NQ69 397 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 LATS2Q9NRM7 1088 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 FGF21Q9NSA1 209 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 IMP3Q9NV31 184 aaKnown RBP10.11□□□□□ -0.79
TTC28-207ENST00000490475 G3BP2Q9UN86 482 aaKnown RBP10.11□□□□□ -0.79
TTC28-207ENST00000490475 WDR37Q9Y2I8 494 aa10.11□□□□□ -0.79
TTC28-207ENST00000490475 SEC16AO15027 2179 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 PIPSLA2A3N6 862 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 CCDC78A2IDD5 438 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 CTAGE9A4FU28 777 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 OR2AG2A6NM03 316 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 ERI2A8K979 691 aaKnown RBP10.1□□□□□ -0.79
TTC28-207ENST00000490475 F8W8V4 182 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 QSOX1O00391 747 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 IFRD1O00458 451 aaPredicted RBP10.1□□□□□ -0.79
TTC28-207ENST00000490475 GPR39O43194 453 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 CPNE3O75131 537 aaKnown RBP10.1□□□□□ -0.79
TTC28-207ENST00000490475 SRP72O76094 671 aaKnown RBP10.1□□□□□ -0.79
TTC28-207ENST00000490475 SUN1O94901 812 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 KRT14P02533 472 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 TCP1P17987 556 aaKnown RBP10.1□□□□□ -0.79
TTC28-207ENST00000490475 ITGALP20701 1170 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 VPS41P49754 854 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 PMS2P54278 862 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 SH3BP2P78314 561 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 BASP1P80723 227 aaKnown RBP10.1□□□□□ -0.79
TTC28-207ENST00000490475 GABPB1Q06547 395 aaPredicted RBP10.1□□□□□ -0.79
TTC28-207ENST00000490475 DMTNQ08495 405 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 ERV3-1Q14264 604 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 NFE2L1Q14494 772 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 CYP1B1Q16678 543 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 GPR33Q49SQ1 333 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 CCDC38Q502W7 563 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 FNBP1LQ5T0N5 605 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 PPP1R21Q6ZMI0 780 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 SYVN1Q86TM6 617 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 LINC00523Q86TU6 105 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 ATCAYQ86WG3 371 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 PTRH1Q86Y79 214 aaKnown RBP10.1□□□□□ -0.79
TTC28-207ENST00000490475 HPS6Q86YV9 775 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 CREG2Q8IUH2 290 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 D2HGDHQ8N465 521 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 DNAAF3Q8N9W5 541 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 HM13Q8TCT9 377 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 C12orf66Q96MD2 445 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 LRFN5Q96NI6 719 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 TWSG1Q9GZX9 223 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 EPN3Q9H201 632 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 FAM96AQ9H5X1 160 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 ASB8Q9H765 288 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 C1GALT1Q9NS00 363 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 HRASLS2Q9NWW9 162 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 FKBPLQ9UIM3 349 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 CRLS1Q9UJA2 301 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 MAN2B2Q9Y2E5 1009 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 SAR1BQ9Y6B6 198 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 LRRK2Q5S007 2527 aa10.1□□□□□ -0.79
TTC28-207ENST00000490475 DOPEY2Q9Y3R5 2298 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 IGHV5-51A0A0C4DH38 117 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 TCRBV7S3A2A0A539 114 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 MROH6A6NGR9 719 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 AGAP14A8MT82 685 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 KIF1CO43896 1103 aaKnown RBP10.09□□□□□ -0.79
TTC28-207ENST00000490475 KDM1AO60341 852 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 PHF2O75151 1096 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 MSL3P1P0C860 447 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 ZNF28P17035 718 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 VARSP26640 1264 aaKnown RBP10.09□□□□□ -0.79
TTC28-207ENST00000490475 PTPN4P29074 926 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 CD151P48509 253 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 PRLHRP49683 370 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 ZNF140P52738 457 aaPredicted RBP10.09□□□□□ -0.79
TTC28-207ENST00000490475 CTSCP53634 463 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 FOXK1P85037 733 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 XIAPP98170 497 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 CDH17Q12864 832 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 GPS1Q13098 491 aa10.09□□□□□ -0.79
TTC28-207ENST00000490475 RPA4Q13156 261 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms