RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 LINC00615Q96LM1 132 aaPredicted RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 AGAP3Q96P47 875 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 WWP1Q9H0M0 922 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 GLOD4Q9HC38 313 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 BPIFA1Q9NP55 256 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 LMBRD1Q9NUN5 540 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 HACD3Q9P035 362 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 LCMT1Q9UIC8 334 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 SERTAD3Q9UJW9 196 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 CFAP20Q9Y6A4 193 aaKnown RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 COLEC10Q9Y6Z7 277 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 A0A087X0T9 212 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 A0A0A6YYK5 440 aaPredicted RBP7.94□□□□□ -1.14
USP39-216ENST00000490193 GLYATL1P3A0A0U1RQE8 302 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 A0A1B0GTH6 734 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 E7EQ34 232 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 PEX12O00623 359 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 PPP1R12AO14974 1030 aaPredicted RBP7.94□□□□□ -1.14
USP39-216ENST00000490193 GPR39O43194 453 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 ZNF749O43361 778 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 SGTAO43765 313 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 UGT1A9O60656 530 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 EPOP01588 193 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 FAM228BP0C875 321 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 ST6GAL1P15907 406 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 UGT1A6P19224 532 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 UGT1A1P22309 533 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 UGT1A4P22310 534 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 PRDX3P30048 256 aaKnown RBP7.94□□□□□ -1.14
USP39-216ENST00000490193 OTX2P32243 289 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 CA5AP35218 305 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 GJC1P36383 396 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 TSFMP43897 325 aaKnown RBP7.94□□□□□ -1.14
USP39-216ENST00000490193 ARCN1P48444 511 aaKnown RBP7.94□□□□□ -1.14
USP39-216ENST00000490193 AP1B1Q10567 949 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 PRKAA1Q13131 559 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 PDK1Q15118 436 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 BCL7AQ4VC05 210 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 TEX44Q53QW1 395 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 LCE2CQ5TA81 110 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 RHBDD2Q6NTF9 364 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 IGFL2Q6UWQ7 119 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 FAM151BQ6UXP7 276 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 OR4E2Q8NGC2 313 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 OR2Y1Q8NGV0 311 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 PPP4R1Q8TF05 950 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 NACC2Q96BF6 587 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 RMDN2Q96LZ7 410 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 TEKT5Q96M29 485 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 TRAPPC9Q96Q05 1148 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 WDR77Q9BQA1 342 aaPredicted RBP7.94□□□□□ -1.14
USP39-216ENST00000490193 CCM2Q9BSQ5 444 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 CEP41Q9BYV8 373 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 CHRNA10Q9GZZ6 450 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 UGT1A7Q9HAW7 530 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 UGT1A10Q9HAW8 530 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 UGT1A8Q9HAW9 530 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 P4HTMQ9NXG6 502 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 UVRAGQ9P2Y5 699 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 NENFQ9UMX5 172 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 HEY1Q9Y5J3 304 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 HEBP2Q9Y5Z4 205 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 AKAP9Q99996 3911 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 HIVEP1P15822 2718 aa7.94□□□□□ -1.14
USP39-216ENST00000490193 C17orf113A0A1B0GUU1 675 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 A0A1W2PQJ5 194 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 C3orf70A6NLC5 250 aaPredicted RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 AGAP14A8MT82 685 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 F5H423 210 aaPredicted RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 DDX3YO15523 660 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 LRRTM2O43300 516 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 PMPCBO75439 489 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 SERPING1P05155 500 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 STSP08842 583 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 EDN3P14138 238 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 MSH3P20585 1137 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 GRNP28799 593 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 PBLDP30039 288 aaPredicted RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 HNRNPH3P31942 346 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 FOLR3P41439 243 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 GLRBP48167 497 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 GABRA4P48169 554 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 LMAN1P49257 510 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 NAA30Q147X3 362 aaPredicted RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 LLGL1Q15334 1064 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 PPP2R5EQ16537 467 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 FILIP1LQ4L180 1135 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 SIRPB2Q5JXA9 342 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 FNBP1LQ5T0N5 605 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 FAM182AQ5T1J6 154 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 B3GNTL1Q67FW5 361 aaPredicted RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 SP5Q6BEB4 398 aaPredicted RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 MRPL14Q6P1L8 145 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 ALKBH5Q6P6C2 394 aaKnown RBP7.93□□□□□ -1.14
USP39-216ENST00000490193 KDELC1Q6UW63 502 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 CDHR3Q6ZTQ4 885 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 B4GALNT4Q76KP1 1039 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 GLT6D1Q7Z4J2 308 aa7.93□□□□□ -1.14
USP39-216ENST00000490193 PPP1R32Q7Z5V6 425 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms