RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 KNTC1P50748 2209 aa17.02■□□□□ 0.32
ERCC3-207ENST00000490062 UNC13CQ8NB66 2214 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 TRBV23OR9-2A0A075B6M9 112 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 IGHV1OR21-1A0A087WYE8 117 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 A0A1W2PQM1 296 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 FAM221BA6H8Z2 402 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 MATN4O95460 622 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 F7P08709 466 aaPredicted RBP17.01■□□□□ 0.31
ERCC3-207ENST00000490062 MCM3P25205 808 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 MAPK9P45984 424 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 LIMK2P53671 638 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 GRTP1Q5TC63 336 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 HECTD2Q5U5R9 776 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 TMPRSS7Q7RTY8 843 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 CNPY4Q8N129 248 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 OR5K2Q8NHB8 316 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 GRAMD1AQ96CP6 724 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 VPS39Q96JC1 886 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 SLC38A3Q99624 504 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 GPR21Q99679 349 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 GPR22Q99680 433 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 SLC30A3Q99726 388 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 RAB33BQ9H082 229 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 POPDC3Q9HBV1 291 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 IMP3Q9NV31 184 aaKnown RBP17.01■□□□□ 0.31
ERCC3-207ENST00000490062 GALPQ9UBC7 116 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 FAM8A1Q9UBU6 413 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 POLG2Q9UHN1 485 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 SLC24A2Q9UI40 661 aa17.01■□□□□ 0.31
ERCC3-207ENST00000490062 MPC1LP0DKB6 136 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 CD1CP29017 333 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 PMS2P54278 862 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 CDKN2DP55273 166 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 VSNL1P62760 191 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 BIRC2Q13490 618 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 GPR18Q14330 331 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 ACSBG2Q5FVE4 666 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 UBAP2Q5T6F2 1119 aaKnown RBP17■□□□□ 0.31
ERCC3-207ENST00000490062 DHRS13Q6UX07 377 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 NAPRTQ6XQN6 538 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 GALNT15Q8N3T1 639 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 DCBLD1Q8N8Z6 715 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 FBXO15Q8NCQ5 510 aaPredicted RBP17■□□□□ 0.31
ERCC3-207ENST00000490062 ACVR1CQ8NER5 493 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 PDLIM5Q96HC4 596 aaKnown RBP17■□□□□ 0.31
ERCC3-207ENST00000490062 NDNQ99608 321 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 EPB41L4BQ9H329 900 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 TFB2MQ9H5Q4 396 aaKnown RBP17■□□□□ 0.31
ERCC3-207ENST00000490062 PDP2Q9P2J9 529 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 TXNDC16Q9P2K2 825 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 EPHA6Q9UF33 1036 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 FETUBQ9UGM5 382 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 RAB21Q9UL25 225 aa17■□□□□ 0.31
ERCC3-207ENST00000490062 PTPRBP23467 1997 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 SPTBN2O15020 2390 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 A0A087WUV0 522 aaPredicted RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 FAM95CA0A1B0GW59 222 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 RIPK2O43353 540 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 WISP3O95389 354 aaPredicted RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 ACSL3O95573 720 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 CPNE6O95741 557 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 RPN2P04844 631 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 RPLP0P05388 317 aaKnown RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 ADRB1P08588 477 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 SPRP35270 261 aaPredicted RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 CCL7P80098 99 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 POU4F1Q01851 419 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 BRD3Q15059 726 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 ERCC6LQ2NKX8 1250 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 KLHL38Q2WGJ6 581 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 WDR74Q6RFH5 385 aaPredicted RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 CYHR1Q6ZMK1 362 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 CTAGE3PQ8IX95 158 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 PPM1NQ8N819 430 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 SIDT2Q8NBJ9 832 aaKnown RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 OR10G6Q8NH81 332 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 SLC44A1Q8WWI5 657 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 ANKRD7Q92527 254 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 TRIT1Q9H3H1 467 aaKnown RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 KCNK4Q9NYG8 393 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 TRMT6Q9UJA5 497 aaKnown RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 ASF1AQ9Y294 204 aa16.99■□□□□ 0.31
ERCC3-207ENST00000490062 CFAP20Q9Y6A4 193 aaKnown RBP16.99■□□□□ 0.31
ERCC3-207ENST00000490062 PRAMEF33A0A0G2JMD5 474 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 D6RAR5 112 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 DUX1O43812 170 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 PSIP1O75475 530 aaKnown RBP16.98■□□□□ 0.31
ERCC3-207ENST00000490062 PIAS1O75925 651 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 TSPAN12O95859 305 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 CCNFP41002 786 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 CSRP3P50461 194 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 OR1D5P58170 312 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 ZFP36L1Q07352 338 aaKnown RBP16.98■□□□□ 0.31
ERCC3-207ENST00000490062 ZKSCAN8Q15776 578 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-207ENST00000490062 DUS1LQ6P1R4 473 aaKnown RBP16.98■□□□□ 0.31
ERCC3-207ENST00000490062 EMBQ6PCB8 327 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 DCUN1D3Q8IWE4 304 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 GPATCH11Q8N954 259 aa16.98■□□□□ 0.31
ERCC3-207ENST00000490062 GFM1Q96RP9 751 aaKnown RBP16.98■□□□□ 0.31
ERCC3-207ENST00000490062 OLFM1Q99784 485 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms