RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MED25Q71SY5 747 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 CCDC50Q8IVM0 306 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 KATNAL2Q8IYT4 538 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 NXPE1Q8N323 547 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 TMEM102Q8N9M5 508 aaPredicted RBP15.4■□□□□ 0.06
PLOD3-216ENST00000489927 GLIS1Q8NBF1 620 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 OR13C4Q8NGS5 318 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 PNPLA2Q96AD5 504 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 FERD3LQ96RJ6 166 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 HEMGNQ9BXL5 484 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 PITPNM3Q9BZ71 974 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 KLHL25Q9H0H3 589 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 FAM96AQ9H5X1 160 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 CASS4Q9NQ75 786 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 GPR83Q9NYM4 423 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 INTUQ9ULD6 942 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 MED13Q9UHV7 2174 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 SHANK1Q9Y566 2161 aa15.4■□□□□ 0.06
PLOD3-216ENST00000489927 NOTCH2Q04721 2471 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 ANXA9O76027 345 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 TPM1P09493 284 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 ATP1B2P14415 290 aaPredicted RBP15.39■□□□□ 0.05
PLOD3-216ENST00000489927 PVRP15151 417 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 RRADP55042 308 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 TMPRSS15P98073 1019 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 MSLNQ13421 630 aaPredicted RBP15.39■□□□□ 0.05
PLOD3-216ENST00000489927 RAPSNQ13702 412 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 HPS6Q86YV9 775 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 VSTM4Q8IW00 320 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 RCOR2Q8IZ40 523 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 OR52E1Q8NGJ3 308 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 ULK4Q96C45 1275 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 RBM41Q96IZ5 413 aaKnown RBP15.39■□□□□ 0.05
PLOD3-216ENST00000489927 TRAPPC9Q96Q05 1148 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 COPS8Q99627 209 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 SMAD5Q99717 465 aaKnown RBP15.39■□□□□ 0.05
PLOD3-216ENST00000489927 SLC7A5P2Q9GIP4 190 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 OR52A5Q9H2C5 316 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 COG4Q9H9E3 785 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 MAP10Q9P2G4 905 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 SERTAD3Q9UJW9 196 aa15.39■□□□□ 0.05
PLOD3-216ENST00000489927 RP1L1Q8IWN7 2480 aaPredicted RBP15.39■□□□□ 0.05
PLOD3-216ENST00000489927 C17orf113A0A1B0GUU1 675 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 CFAP99D6REC4 459 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 E7EQ34 232 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 H7C0C1 242 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 CCL22O00626 93 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 MAP3K7O43318 606 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 ZNF749O43361 778 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 CBFA2T2O43439 604 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 KRT86O43790 486 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 CRTAMO95727 393 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 ATP5OP48047 213 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 HADHBP55084 474 aaKnown RBP15.38■□□□□ 0.05
PLOD3-216ENST00000489927 ZNF658BQ4V348 819 aaPredicted RBP15.38■□□□□ 0.05
PLOD3-216ENST00000489927 ZNF385CQ66K41 422 aaPredicted RBP15.38■□□□□ 0.05
PLOD3-216ENST00000489927 ITPRIPL1Q6GPH6 555 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 CDHR3Q6ZTQ4 885 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 MICALCLQ6ZW33 695 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 BBS12Q6ZW61 710 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 AMIGO1Q86WK6 493 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 PHC3Q8NDX5 983 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 PRR7Q8TB68 274 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 C19orf60Q96EN9 201 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 SGSM3Q96HU1 749 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 DPH2Q9BQC3 489 aaPredicted RBP15.38■□□□□ 0.05
PLOD3-216ENST00000489927 SLC29A3Q9BZD2 475 aa15.38■□□□□ 0.05
PLOD3-216ENST00000489927 TFB2MQ9H5Q4 396 aaKnown RBP15.38■□□□□ 0.05
PLOD3-216ENST00000489927 C2orf74A8MZ97 194 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 C9J4A7 227 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 APOC4-APOC2K7ER74 178 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 IFRD1O00458 451 aaPredicted RBP15.37■□□□□ 0.05
PLOD3-216ENST00000489927 KLF7O75840 302 aaPredicted RBP15.37■□□□□ 0.05
PLOD3-216ENST00000489927 APOC2P02655 101 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 ITGALP20701 1170 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 AGXTP21549 392 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 PSMB4P28070 264 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 PDHA2P29803 388 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 OTX2P32243 289 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 CDKN1CP49918 316 aaPredicted RBP15.37■□□□□ 0.05
PLOD3-216ENST00000489927 ZNF140P52738 457 aaPredicted RBP15.37■□□□□ 0.05
PLOD3-216ENST00000489927 ANKRD20A2Q5SQ80 823 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 ANKRD20A1Q5TYW2 823 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 ANKRD20A3Q5VUR7 823 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 SNX20Q7Z614 316 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 RAB43Q86YS6 212 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 ADGRF3Q8IZF5 1079 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 HEXDCQ8WVB3 486 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 KRT35Q92764 455 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 HGH1Q9BTY7 390 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 XKR8Q9H6D3 395 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 MVB12BQ9H7P6 319 aa15.37■□□□□ 0.05
PLOD3-216ENST00000489927 AAR2Q9Y312 384 aaKnown RBP15.37■□□□□ 0.05
PLOD3-216ENST00000489927 IGLV3-16A0A075B6K0 115 aa15.36■□□□□ 0.05
PLOD3-216ENST00000489927 DDAH2O95865 285 aa15.36■□□□□ 0.05
PLOD3-216ENST00000489927 HBQ1P09105 142 aa15.36■□□□□ 0.05
PLOD3-216ENST00000489927 VARSP26640 1264 aaKnown RBP15.36■□□□□ 0.05
PLOD3-216ENST00000489927 MC4RP32245 332 aa15.36■□□□□ 0.05
PLOD3-216ENST00000489927 HADHAP40939 763 aa15.36■□□□□ 0.05
PLOD3-216ENST00000489927 CD151P48509 253 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms