RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TNNT2P45379 298 aaPredicted RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 THBS3P49746 956 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 VPS41P49754 854 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 KHKP50053 298 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 NANOS2P60321 138 aaKnown RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 GMFBP60983 142 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 PRKCEQ02156 737 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 GAD2Q05329 585 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SPOCK1Q08629 439 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CHIT1Q13231 466 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SNAPC1Q16533 368 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ME3Q16798 604 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 VWC2Q2TAL6 325 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TWISTNBQ3B726 338 aaPredicted RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CBWD6Q4V339 395 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TAF1BQ53T94 588 aaPredicted RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CBWD3Q5JTY5 395 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 DNTTIP2Q5QJE6 756 aaKnown RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 C10orf76Q5T2E6 689 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 PRAMEF8Q5VWM4 474 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 DAB2IPQ5VWQ8 1189 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 HEPHL1Q6MZM0 1159 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 BRAT1Q6PJG6 821 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SEPT14Q6ZU15 432 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 AMZ2Q86W34 360 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CAMK1DQ8IU85 385 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 GHDCQ8N2G8 530 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 FAM133AQ8N9E0 248 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CLEC1AQ8NC01 280 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 C11orf65Q8NCR3 313 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 DENND6BQ8NEG7 585 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 DNAAF1Q8NEP3 725 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 OR14L1PQ8NHC6 308 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 KIAA1524Q8TCG1 905 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TAS1R2Q8TE23 839 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 GDPD5Q8WTR4 605 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 METTL21AQ8WXB1 218 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 IP6K1Q92551 441 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC25A28Q96A46 364 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ALG14Q96F25 216 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 DTD2Q96FN9 168 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CLMNQ96JQ2 1002 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 MARK4Q96L34 752 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 GPR78Q96P69 363 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 GAL3ST4Q96RP7 486 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SEMA3CQ99985 751 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF577Q9BSK1 485 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 EGLN1Q9GZT9 426 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SLCO5A1Q9H2Y9 848 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 VPS37BQ9H9H4 285 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 Q9N2J8 555 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TUFT1Q9NNX1 390 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 RAB9BQ9NP90 201 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 NGBQ9NPG2 151 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ASAH2Q9NR71 780 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SERINC1Q9NRX5 453 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ABHD10Q9NUJ1 306 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 MTMR10Q9NXD2 777 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 HOXC10Q9NYD6 342 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TMOD2Q9NZR1 351 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 HMG20BQ9P0W2 317 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 FBXW2Q9UKT8 454 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 MTUS1Q9ULD2 1270 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 STX8Q9UNK0 236 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF148Q9UQR1 794 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SNX9Q9Y5X1 595 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ZFYVE9O95405 1425 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 UHRF1BP1Q6BDS2 1440 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 UBR1Q8IWV7 1749 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ANKRD30BQ9BXX2 1392 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TMEM2Q9UHN6 1383 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 MYO5BQ9ULV0 1848 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TMEM131LA2VDJ0 1609 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 LTBP4Q8N2S1 1624 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF335Q9H4Z2 1342 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 SPATA31E1Q6ZUB1 1445 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 CTAGE9A4FU28 777 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 GPR89AB7ZAQ6 455 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 H0YCG3 227 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 TRIM77I1YAP6 450 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 SEC14L5O43304 696 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 GPRIN2O60269 458 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 HBP1O60381 514 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 BBOX1O75936 387 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 GPR89BP0CG08 455 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 SRCP12931 536 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 PRG2P13727 222 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 CDAP32320 146 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 PTGER3P43115 390 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 GMPSP49915 693 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 STX1BP61266 288 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 RBPJQ06330 500 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 OLIG2Q13516 323 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 CUL2Q13617 745 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 KCNC3Q14003 757 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 CNGA3Q16281 694 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 TPGS2Q68CL5 300 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ETFRF1Q6IPR1 90 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF549Q6P9A3 640 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 RBM44Q6ZP01 1051 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms