RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 TMPRSS3P57727 454 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 OR1D5P58170 312 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 ATP6V0D1P61421 351 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 CDK3Q00526 305 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 LY6DQ14210 128 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 GALNT3Q14435 633 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 RFTN1Q14699 578 aaPredicted RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 GRM3Q14832 879 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 LLGL1Q15334 1064 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 SEPT7Q16181 437 aaKnown RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 C14orf28Q4W4Y0 310 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 ZFYVE27Q5T4F4 411 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 PHF19Q5T6S3 580 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 NKAIN2Q5VXU1 208 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 PPP1R2P3Q6NXS1 205 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 PNCKQ6P2M8 343 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 ALKBH5Q6P6C2 394 aaKnown RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 NPNTQ6UXI9 565 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 TAOK1Q7L7X3 1001 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 LYSMD3Q7Z3D4 306 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 GPR155Q7Z3F1 870 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 PATL1Q86TB9 770 aaKnown RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 GKN2Q86XP6 184 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 NRROSQ86YC3 692 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 LRRC34Q8IZ02 419 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 NIPA2Q8N8Q9 360 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 RCBTB1Q8NDN9 531 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 FAM13CQ8NE31 585 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 LPCAT1Q8NF37 534 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 ACTRT1Q8TDG2 376 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 STARD8Q92502 1023 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 ZNF578Q96N58 590 aaPredicted RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 BTBD9Q96Q07 612 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 UBL7Q96S82 380 aaPredicted RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 NUDT22Q9BRQ3 303 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 GRIP2Q9C0E4 1043 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 KLHL4Q9C0H6 718 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 RBM38Q9H0Z9 239 aaKnown RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 ABCG8Q9H221 673 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 TPK1Q9H3S4 243 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 SEMA6CQ9H3T2 930 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 GOLPH3Q9H4A6 298 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 GPAMQ9HCL2 828 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 MRPL47Q9HD33 250 aaKnown RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 EURLQ9NYK6 297 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 NCKIPSDQ9NZQ3 722 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 FOXJ2Q9P0K8 574 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 TMEM9Q9P0T7 183 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 KLHL14Q9P2G3 628 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 NKX1-2Q9UD57 310 aaPredicted RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 IP6K2Q9UHH9 426 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 NENFQ9UMX5 172 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 GUCA1BQ9UMX6 200 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 CHKBQ9Y259 395 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 B3GNT3Q9Y2A9 372 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 LOXL2Q9Y4K0 774 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 HRH3Q9Y5N1 445 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 OAS3Q9Y6K5 1087 aaKnown RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 DGKBQ9Y6T7 804 aa5.74□□□□□ -1.49
CNOT9-207ENST00000489687 UBR5O95071 2799 aaPredicted RBP5.74□□□□□ -1.49
CNOT9-207ENST00000489687 USP9XQ93008 2570 aaPredicted RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 DOPEY2Q9Y3R5 2298 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 TRBV23OR9-2A0A075B6M9 112 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 CCDC187A0A096LP49 1063 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 PRAMEF33A0A0G2JMD5 474 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 CDRT15L2A8MXV6 281 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 J3QL48 77 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 HGSO14964 777 aaPredicted RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 ATXN7O15265 892 aaPredicted RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 PRAMEF10O60809 474 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 SUPT3HO75486 399 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 DCTN3O75935 186 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 PROSCO94903 275 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 TNFP01375 233 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 KRT1P04264 644 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 CEACAM5P06731 702 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 WT1P19544 449 aaPredicted RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 CCNCP24863 283 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 MAPK1P28482 360 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 ALDH4A1P30038 563 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 SLC5A2P31639 672 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 CTNNA1P35221 906 aaKnown RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 SERPINB6P35237 376 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 GARSP41250 739 aaKnown RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 HCAR3P49019 387 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 PPM1FP49593 454 aaPredicted RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 RENBPP51606 427 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 ARSEP51690 589 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 RAP1GDS1P52306 607 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 MAPK10P53779 464 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 EPHB1P54762 984 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 RPS3AP61247 264 aaKnown RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 MAGOHP61326 146 aaKnown RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 DYNLT1P63172 113 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 BASP1P80723 227 aaKnown RBP5.73□□□□□ -1.49
CNOT9-207ENST00000489687 CTBSQ01459 385 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 GUCY2DQ02846 1103 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 C2orf54Q08AI8 447 aa5.73□□□□□ -1.49
CNOT9-207ENST00000489687 NIPAL4Q0D2K0 466 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms