RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SPATA6Q9NWH7 488 aaPredicted RBP13.85□□□□□ -0.19
VPS26A-205ENST00000489656 CD274Q9NZQ7 290 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 SLC23A2Q9UGH3 650 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 ZNHIT2Q9UHR6 403 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 ACSL5Q9ULC5 683 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 SUFUQ9UMX1 484 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 PDE10AQ9Y233 779 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 CA5BQ9Y2D0 317 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.85□□□□□ -0.19
VPS26A-205ENST00000489656 TMEM131Q92545 1883 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 GON4LQ3T8J9 2241 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PI4KAP42356 2102 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 TMEM221A6NGB7 291 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 M0R296 226 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 ITM2AO43736 263 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 SNX2O60749 519 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 S100BP04271 92 aaPredicted RBP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 RPS17P08708 135 aaKnown RBP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 ACADLP28330 430 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PDHA2P29803 388 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 ARRB2P32121 409 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 THOP1P52888 689 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PTK2BQ14289 1009 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 NFE2L1Q14494 772 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PFKFB4Q16877 469 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PLA2G4EQ3MJ16 856 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 UNC50Q53HI1 259 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 TPRG1LQ5T0D9 272 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 CGB2Q6NT52 195 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 TTC23LQ6PF05 361 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 UNC5DQ6UXZ4 953 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 FAM83HQ6ZRV2 1179 aaPredicted RBP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 Q6ZSR6 202 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 FRMD7Q6ZUT3 714 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PDZD3Q86UT5 571 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 WDR5BQ86VZ2 330 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 DCP2Q8IU60 420 aaKnown RBP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 CRLF3Q8IUI8 442 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 TCAIMQ8N3R3 496 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PPP4R1Q8TF05 950 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 OR1E3Q8WZA6 343 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 FOPNLQ96NB1 174 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 TMEM121BQ9BXQ6 578 aaPredicted RBP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 TRIM54Q9BYV2 358 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 GSTO2Q9H4Y5 243 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 TSR3Q9UJK0 312 aaKnown RBP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PTBP2Q9UKA9 531 aaKnown RBP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 PRKAB1Q9Y478 270 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 TNPO3Q9Y5L0 923 aaKnown RBP13.84□□□□□ -0.19
VPS26A-205ENST00000489656 DGKBQ9Y6T7 804 aa13.84□□□□□ -0.19
VPS26A-205ENST00000489656 NDUFAB1O14561 156 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 SNX3O60493 162 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 HSPA4LO95757 839 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 CATP04040 527 aaKnown RBP13.83□□□□□ -0.2
VPS26A-205ENST00000489656 ANXA5P08758 320 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 GGT5P36269 586 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 RPIAP49247 311 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 HNMTP50135 292 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 HK2P52789 917 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 RPL6Q02878 288 aaKnown RBP13.83□□□□□ -0.2
VPS26A-205ENST00000489656 CFAP157Q5JU67 520 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 ANKS6Q68DC2 871 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 ENPP7Q6UWV6 458 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 ATG14Q6ZNE5 492 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 IQCHQ86VS3 1027 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.83□□□□□ -0.2
VPS26A-205ENST00000489656 KIRREL3Q8IZU9 778 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 LSMEM2Q8N112 164 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 OR13H1Q8NG92 308 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 MCOLN3Q8TDD5 553 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 ZNF483Q8TF39 744 aaPredicted RBP13.83□□□□□ -0.2
VPS26A-205ENST00000489656 SKA2Q8WVK7 121 aaPredicted RBP13.83□□□□□ -0.2
VPS26A-205ENST00000489656 RHBDF1Q96CC6 855 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 OR2M4Q96R27 311 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 FAM107BQ9H098 131 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 DUSP15Q9H1R2 295 aaPredicted RBP13.83□□□□□ -0.2
VPS26A-205ENST00000489656 MRPL40Q9NQ50 206 aaKnown RBP13.83□□□□□ -0.2
VPS26A-205ENST00000489656 TM7SF3Q9NS93 570 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 FAM8A1Q9UBU6 413 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 KLQ9UEF7 1012 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 BOLA1Q9Y3E2 137 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 RAP2CQ9Y3L5 183 aa13.83□□□□□ -0.2
VPS26A-205ENST00000489656 ARHGEF33A8MVX0 844 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 LYPLA1O75608 230 aaPredicted RBP13.82□□□□□ -0.2
VPS26A-205ENST00000489656 SIX3O95343 332 aaPredicted RBP13.82□□□□□ -0.2
VPS26A-205ENST00000489656 HIST1H2AGP0C0S8 130 aaPredicted RBP13.82□□□□□ -0.2
VPS26A-205ENST00000489656 TROVE2P10155 538 aaKnown RBP eCLIP13.82□□□□□ -0.2
VPS26A-205ENST00000489656 ACP5P13686 325 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 HIST1H2ADP20671 130 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 EEF1DP29692 281 aaKnown RBP13.82□□□□□ -0.2
VPS26A-205ENST00000489656 GNPDA1P46926 289 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 RACK1P63244 317 aaKnown RBP13.82□□□□□ -0.2
VPS26A-205ENST00000489656 DMWDQ09019 674 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 OVGP1Q12889 678 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 ABRQ12979 859 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 PRKAA1Q13131 559 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 LRP8Q14114 963 aa13.82□□□□□ -0.2
VPS26A-205ENST00000489656 ARL13AQ5H913 290 aaPredicted RBP13.82□□□□□ -0.2
VPS26A-205ENST00000489656 GKAP1Q5VSY0 366 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms