RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ASPMQ8IZT6 3477 aa16.9■□□□□ 0.3
MDC1-206ENST00000489540 APC2O95996 2303 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 OR5K3A6NET4 321 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 SLCO2B1O94956 709 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 S1PR4O95977 384 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 FGF3P11487 239 aaPredicted RBP16.89■□□□□ 0.29
MDC1-206ENST00000489540 SLC5A2P31639 672 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 MAPK10P53779 464 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 HIF1AQ16665 826 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 MSS51Q4VC12 460 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 SPANXN3Q5MJ09 141 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 ZNF470Q6ECI4 717 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 ARMC6Q6NXE6 501 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 IRGCQ6NXR0 463 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 NAPRTQ6XQN6 538 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 CENPUQ71F23 418 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 OOSP2Q86WS3 158 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 TBC1D21Q8IYX1 336 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 SLC22A15Q8IZD6 547 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 KRT222Q8N1A0 295 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 OR4E2Q8NGC2 313 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 GSDMBQ8TAX9 411 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 LCN9Q8WX39 176 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 JPH3Q8WXH2 748 aaPredicted RBP16.89■□□□□ 0.29
MDC1-206ENST00000489540 USP7Q93009 1102 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 FAM167BQ9BTA0 163 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 HRASLS2Q9NWW9 162 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.89■□□□□ 0.29
MDC1-206ENST00000489540 IL1RAPL1Q9NZN1 696 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 POLG2Q9UHN1 485 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 CRYL1Q9Y2S2 319 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 EPG5Q9HCE0 2579 aa16.89■□□□□ 0.29
MDC1-206ENST00000489540 OR6C74A6NCV1 312 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 EFCAB7A8K855 629 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 KIF2AO00139 706 aaPredicted RBP16.88■□□□□ 0.29
MDC1-206ENST00000489540 RASSF9O75901 435 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 URI1O94763 535 aaPredicted RBP16.88■□□□□ 0.29
MDC1-206ENST00000489540 ETV5P41161 510 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 RPL21P46778 160 aaKnown RBP16.88■□□□□ 0.29
MDC1-206ENST00000489540 LEPRP48357 1165 aaKnown RBP16.88■□□□□ 0.29
MDC1-206ENST00000489540 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 ACACAQ13085 2346 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 CALCOCO2Q13137 446 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 CRYMQ14894 314 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 CTSL3PQ5NE16 218 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 PLEKHS1Q5SXH7 462 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 CACHD1Q5VU97 1274 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 OTOAQ7RTW8 1153 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 PRSS42Q7Z5A4 293 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 FAM129CQ86XR2 697 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 LKAAEAR1Q8TD35 194 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 DCBLD2Q96PD2 775 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 CD180Q99467 661 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 TRIT1Q9H3H1 467 aaKnown RBP16.88■□□□□ 0.29
MDC1-206ENST00000489540 SRMSQ9H3Y6 488 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 ZNF768Q9H5H4 540 aaKnown RBP16.88■□□□□ 0.29
MDC1-206ENST00000489540 OCIAD1Q9NX40 245 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 SLC39A1Q9NY26 324 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 WHRNQ9P202 907 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 ACSL6Q9UKU0 697 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 CDYLQ9Y232 598 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 PCDHGA3Q9Y5H0 932 aa16.88■□□□□ 0.29
MDC1-206ENST00000489540 MATN2O00339 956 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 RAD51CO43502 376 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 KDM1AO60341 852 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 PKMP14618 531 aaKnown RBP16.87■□□□□ 0.29
MDC1-206ENST00000489540 CHRM3P20309 590 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 CD82P27701 267 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 CSE1LP55060 971 aaKnown RBP16.87■□□□□ 0.29
MDC1-206ENST00000489540 RAB15P59190 212 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 MRPS25P82663 173 aaKnown RBP16.87■□□□□ 0.29
MDC1-206ENST00000489540 MC2RQ01718 297 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 PRKAA1Q13131 559 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 PRKG2Q13237 762 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 CTBP1Q13363 440 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 TUBB2AQ13885 445 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 HSP90AA5PQ58FG0 334 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 KCNMB4Q86W47 210 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 DENND6AQ8IWF6 608 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 OR52E1Q8NGJ3 308 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 OR5K2Q8NHB8 316 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 UBXN4Q92575 508 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 ZNF592Q92610 1267 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 TUBB2BQ9BVA1 445 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 DDA1Q9BW61 102 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 ASPSCR1Q9BZE9 553 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 DPH1Q9BZG8 443 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 FBXO8Q9NRD0 319 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 LATS2Q9NRM7 1088 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 SEMA5BQ9P283 1151 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 ZC3H7BQ9UGR2 993 aaKnown RBP16.87■□□□□ 0.29
MDC1-206ENST00000489540 FBXO5Q9UKT4 447 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 UTP11Q9Y3A2 253 aaKnown RBP16.87■□□□□ 0.29
MDC1-206ENST00000489540 FRYQ5TBA9 3013 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 URB1O60287 2271 aaKnown RBP16.87■□□□□ 0.29
MDC1-206ENST00000489540 TP73O15350 636 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 PRAMEF10O60809 474 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 BANF1O75531 89 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 RPN2P04844 631 aa16.87■□□□□ 0.29
MDC1-206ENST00000489540 DEKP35659 375 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms