RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 GLIS1Q8NBF1 620 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 PHC3Q8NDX5 983 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 FCRL4Q96PJ5 515 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 NRTNQ99748 197 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 SLC25A18Q9H1K4 315 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 SOHLH2Q9NX45 425 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 SLC2A6Q9UGQ3 507 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 POMT2Q9UKY4 750 aa22.37■■□□□ 1.17
COL9A3-213ENST00000489045 GSAPA4D1B5 854 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 LAMB3Q13751 1172 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 DEFB109BQ30KR1 87 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 CRTC2Q53ET0 693 aaPredicted RBP22.36■■□□□ 1.17
COL9A3-213ENST00000489045 TSTD2Q5T7W7 516 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 BPHLQ86WA6 291 aaPredicted RBP22.36■■□□□ 1.17
COL9A3-213ENST00000489045 OR52E1Q8NGJ3 308 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 TFGQ92734 400 aaPredicted RBP22.36■■□□□ 1.17
COL9A3-213ENST00000489045 HDAC10Q969S8 669 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.36■■□□□ 1.17
COL9A3-213ENST00000489045 RANBP9Q96S59 729 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 HGH1Q9BTY7 390 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 MVB12BQ9H7P6 319 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 LHX9Q9NQ69 397 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 CASS4Q9NQ75 786 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 PAK5Q9P286 719 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 PADI1Q9ULC6 663 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 BTRCQ9Y297 605 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 BSNQ9UPA5 3926 aa22.36■■□□□ 1.17
COL9A3-213ENST00000489045 PYCARD-AS1I3L0S3 204 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 MATN2O00339 956 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 QSOX1O00391 747 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 BTN3A1O00481 513 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 KATNA1O75449 491 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 GOT2P00505 430 aaKnown RBP22.35■■□□□ 1.17
COL9A3-213ENST00000489045 FTH1P02794 183 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 APRTP07741 180 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 CCDC175P0C221 793 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 CDH3P22223 829 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 TUBB4BP68371 445 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 TUBB2AQ13885 445 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 BOP1Q14137 746 aaKnown RBP22.35■■□□□ 1.17
COL9A3-213ENST00000489045 TMTC4Q5T4D3 741 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 AFTPHQ6ULP2 937 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 CT55Q8WUE5 264 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 ELMO1Q92556 727 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 ZNF778Q96MU6 729 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 TUBB2BQ9BVA1 445 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 TFB2MQ9H5Q4 396 aaKnown RBP22.35■■□□□ 1.17
COL9A3-213ENST00000489045 KCND3Q9UK17 655 aa22.35■■□□□ 1.17
COL9A3-213ENST00000489045 SLC9B1P1A6NJY1 282 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 BTN3A3O00478 584 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 LIN7AO14910 233 aaPredicted RBP22.34■■□□□ 1.17
COL9A3-213ENST00000489045 NTRK1P04629 796 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 ZSCAN5DPP0CG00 497 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 ADRA1DP25100 572 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 ACVR1Q04771 509 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 PRKG2Q13237 762 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 DNASE1L3Q13609 305 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 BRD3Q15059 726 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 CCNG2Q16589 344 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 ZNF662Q6ZS27 426 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 ZNF501Q96CX3 271 aaPredicted RBP22.34■■□□□ 1.17
COL9A3-213ENST00000489045 TLR10Q9BXR5 811 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 XKR8Q9H6D3 395 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 C1GALT1Q9NS00 363 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 TUBD1Q9UJT1 453 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 RIMKLBQ9ULI2 386 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 TCAF1Q9Y4C2 921 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 PCDHB3Q9Y5E6 796 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 SPTBP11277 2137 aa22.34■■□□□ 1.17
COL9A3-213ENST00000489045 OR1I1O60431 355 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 SCRG1O75711 98 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 OR56A5P0C7T3 313 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 RPL22P35268 128 aaKnown RBP22.33■■□□□ 1.17
COL9A3-213ENST00000489045 LYPLAL1Q5VWZ2 237 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 NAPRTQ6XQN6 538 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 AMIGO1Q86WK6 493 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 TMEM126BQ8IUX1 230 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 OR8K5Q8NH50 307 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 APOBEC4Q8WW27 367 aaKnown RBP22.33■■□□□ 1.17
COL9A3-213ENST00000489045 AKIRIN1Q9H9L7 192 aaPredicted RBP22.33■■□□□ 1.17
COL9A3-213ENST00000489045 KCND1Q9NSA2 647 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 PCDHGA6Q9Y5G7 932 aa22.33■■□□□ 1.17
COL9A3-213ENST00000489045 MYO18BQ8IUG5 2567 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 CPNE3O75131 537 aaKnown RBP22.32■■□□□ 1.16
COL9A3-213ENST00000489045 FURINP09958 794 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 PRDX3P30048 256 aaKnown RBP22.32■■□□□ 1.16
COL9A3-213ENST00000489045 ERV3-1Q14264 604 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 SYTL3Q4VX76 610 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 ZNF534Q76KX8 674 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 NLRP9Q7RTR0 991 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 LRRC8AQ8IWT6 810 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 ADGRF3Q8IZF5 1079 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 PPHLN1Q8NEY8 458 aaKnown RBP22.32■■□□□ 1.16
COL9A3-213ENST00000489045 OR5AR1Q8NGP9 310 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 OR6P1Q8NGX9 317 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 OR4L1Q8NH43 312 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 TTC1Q99614 292 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 ICKQ9UPZ9 632 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 ASF1AQ9Y294 204 aa22.32■■□□□ 1.16
COL9A3-213ENST00000489045 SNRNP200O75643 2136 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 468.4 ms