RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ARPC4-TTLL3A0A0A6YYG9 625 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TCRBV7S3A2A0A539 114 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 C1orf226A1L170 272 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 MAGEA13PA6NCF6 341 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ANKDD1BA6NHY2 528 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 HSPB2A8KAH6 182 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FOXO6A8MYZ6 492 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FAM157AC9JC47 383 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 RNASET2O00584 256 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 CHADO15335 359 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 CACNG3O60359 315 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 PRAMEF11O60813 436 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 EPN2O95208 641 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 GH2P01242 217 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 IL1AP01583 271 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 PCCBP05166 539 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FESP07332 822 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 IL6RP08887 468 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 RAB40ALP0C0E4 278 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 HKR1P10072 659 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 G6PDP11413 515 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 PCNAP12004 261 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 PPP3CBP16298 524 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 GJA1P17302 382 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 LBPP18428 481 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ACAT1P24752 427 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ITGB8P26012 769 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 PSMA5P28066 241 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 CCR1P32246 355 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 CYP2C18P33260 490 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 PRCPP42785 496 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 HNRNPMP52272 730 aaKnown RBP eCLIP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 CACNA2D1P54289 1103 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 SRP54P61011 504 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 WDR5P61964 334 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 PSG6Q00889 435 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 E2F1Q01094 437 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 CFHR3Q02985 330 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 GIT2Q14161 759 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 STXBP2Q15833 593 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 HSPB2Q16082 182 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 UGP2Q16851 508 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 BEAN1Q3B7T3 259 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FILIP1LQ4L180 1135 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FAM98BQ52LJ0 330 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TAF1BQ53T94 588 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 SPOUT1Q5T280 376 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 LRRC8EQ6NSJ5 796 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF474Q6S9Z5 364 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 METAP1DQ6UB28 335 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 DLEU7Q6UYE1 221 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 DPPA4Q7L190 304 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 IRF2BP2Q7Z5L9 587 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 SPATA2LQ8IUW3 424 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 MAPKAPK5Q8IW41 473 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 SLC35F3Q8IY50 421 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FBXO39Q8N4B4 442 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ARL14Q8N4G2 192 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 PAQR4Q8N4S7 273 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 EIF1ADQ8N9N8 165 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM185AQ8NFB2 350 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 OR52N4Q8NGI2 321 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 OR56B1Q8NGI3 324 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 HUS1BQ8NHY5 278 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 AGR3Q8TD06 166 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ACTRT2Q8TDY3 377 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FUBP1Q96AE4 644 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM125Q96AQ2 219 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 SLCO4A1Q96BD0 722 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 BSCL2Q96G97 398 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 RBM14Q96PK6 669 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 NUDCD1Q96RS6 583 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FEVQ99581 238 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 GPA33Q99795 319 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ASCL2Q99929 193 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 CCDC77Q9BR77 488 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 MXRA8Q9BRK3 442 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 GATA5Q9BWX5 397 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TEX101Q9BY14 249 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 SLC29A3Q9BZD2 475 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 WNT5BQ9H1J7 359 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM245Q9H330 911 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 UBQLN3Q9H347 655 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FN3KQ9H479 309 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 LRRC40Q9H9A6 602 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 MAGEF1Q9HAY2 307 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 HOMER3Q9NSC5 361 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 KLC4Q9NSK0 619 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM74BQ9NUR3 256 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TRPM5Q9NZQ8 1165 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 RAI14Q9P0K7 980 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 RNF181Q9P0P0 153 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 C6orf203Q9P0P8 240 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 ANKFY1Q9P2R3 1169 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TESQ9UGI8 421 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 UBQLN2Q9UHD9 624 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 RCOR1Q9UKL0 485 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms