RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 MT-ND3P03897 115 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 FURINP09958 794 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 ZSCAN5DPP0CG00 497 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 CDH3P22223 829 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 FDFT1P37268 417 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 CD151P48509 253 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 GSDMDP57764 484 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 TUBB4BP68371 445 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 CDH17Q12864 832 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 RPA4Q13156 261 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 DNASE1L3Q13609 305 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 TUBB2AQ13885 445 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 TMTC4Q5T4D3 741 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 MEI1Q5TIA1 1274 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 FAM199XQ6PEV8 388 aaPredicted RBP11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 NAPRTQ6XQN6 538 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 ATG14Q6ZNE5 492 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 TMEM135Q86UB9 458 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 GLIS1Q8NBF1 620 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 OR13J1Q8NGT2 312 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 TFGQ92734 400 aaPredicted RBP11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 FCRL4Q96PJ5 515 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 RUFY1Q96T51 708 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 HGH1Q9BTY7 390 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 TUBB2BQ9BVA1 445 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 MVB12BQ9H7P6 319 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 LZTFL1Q9NQ48 299 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 ZNF71Q9NQZ8 489 aaPredicted RBP11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 KCND1Q9NSA2 647 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 SOHLH2Q9NX45 425 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 KCND3Q9UK17 655 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 POMT2Q9UKY4 750 aa11.6□□□□□ -0.55
CCHCR1-215ENST00000488920 HEATR9A2RTY3 570 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 CDC14CA4D256 554 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 BTN3A1O00481 513 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 OR1I1O60431 355 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 CREG1O75629 220 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 SCRG1O75711 98 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 GOT2P00505 430 aaKnown RBP11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 APRTP07741 180 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 ADRA1DP25100 572 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 PRDX3P30048 256 aaKnown RBP11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 FOXN2P32314 431 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 RPL22P35268 128 aaKnown RBP11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 NSG1P42857 185 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 KCNC4Q03721 635 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 BOP1Q14137 746 aaKnown RBP11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 CRTC2Q53ET0 693 aaPredicted RBP11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 TSTD2Q5T7W7 516 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 PRAMEF17Q5VTA0 474 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 AMIGO1Q86WK6 493 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 TMEM126BQ8IUX1 230 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 CCDC89Q8N998 374 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 OR52E1Q8NGJ3 308 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 OR6P1Q8NGX9 317 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 ELMO1Q92556 727 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 ZNF501Q96CX3 271 aaPredicted RBP11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 ZNF778Q96MU6 729 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 TLR10Q9BXR5 811 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 TWSG1Q9GZX9 223 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 KLHL25Q9H0H3 589 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 TFB2MQ9H5Q4 396 aaKnown RBP11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 CASS4Q9NQ75 786 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 C1GALT1Q9NS00 363 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 TUBD1Q9UJT1 453 aa11.59□□□□□ -0.55
CCHCR1-215ENST00000488920 TENM4Q6N022 2769 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 MATN2O00339 956 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 LIN7AO14910 233 aaPredicted RBP11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 ARHGAP6O43182 974 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 WISP1O95388 367 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 FTH1P02794 183 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 GSTM1P09488 218 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 PVRP15151 417 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 ST6GAL1P15907 406 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 GSTM4Q03013 218 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 SEMA5AQ13591 1074 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 LAMB3Q13751 1172 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 ITIH4Q14624 930 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 SIX1Q15475 284 aaPredicted RBP11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 CCNG2Q16589 344 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 KCTD19Q17RG1 926 aaPredicted RBP11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 LYPLAL1Q5VWZ2 237 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 PACS1Q6VY07 963 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 ADGRF3Q8IZF5 1079 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 CARFQ8N187 725 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 SLC38A9Q8NBW4 561 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 OR5AR1Q8NGP9 310 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 OR8K5Q8NH50 307 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 C9orf43Q8TAL5 461 aaPredicted RBP11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 UBE2Q2Q8WVN8 375 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 MR1Q95460 341 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 ABHD17AQ96GS6 310 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 RANBP9Q96S59 729 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 ACTL8Q9H568 366 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 ACTR10Q9NZ32 417 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 PAK5Q9P286 719 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 ASF1AQ9Y294 204 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 BTRCQ9Y297 605 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms