RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 DFNA5O60443 496 aa19■□□□□ 0.63
CCM2-216ENST00000488727 PIAS2O75928 621 aa19■□□□□ 0.63
CCM2-216ENST00000488727 TNFP01375 233 aa19■□□□□ 0.63
CCM2-216ENST00000488727 CELA2BP08218 269 aaPredicted RBP19■□□□□ 0.63
CCM2-216ENST00000488727 GPR89BP0CG08 455 aa19■□□□□ 0.63
CCM2-216ENST00000488727 CPA3P15088 417 aa19■□□□□ 0.63
CCM2-216ENST00000488727 ALOX15P16050 662 aaPredicted RBP19■□□□□ 0.63
CCM2-216ENST00000488727 EPHA8P29322 1005 aaPredicted RBP19■□□□□ 0.63
CCM2-216ENST00000488727 BLKP51451 505 aa19■□□□□ 0.63
CCM2-216ENST00000488727 HNRNPKP61978 463 aaKnown RBP eCLIP19■□□□□ 0.63
CCM2-216ENST00000488727 THOC5Q13769 683 aaKnown RBP19■□□□□ 0.63
CCM2-216ENST00000488727 TYSND1Q2T9J0 566 aa19■□□□□ 0.63
CCM2-216ENST00000488727 AARS2Q5JTZ9 985 aaKnown RBP19■□□□□ 0.63
CCM2-216ENST00000488727 WASHC2DQ5SRD0 308 aa19■□□□□ 0.63
CCM2-216ENST00000488727 MRNIPQ6NTE8 343 aa19■□□□□ 0.63
CCM2-216ENST00000488727 CRTC3Q6UUV7 619 aa19■□□□□ 0.63
CCM2-216ENST00000488727 ALYREFQ86V81 257 aaKnown RBP19■□□□□ 0.63
CCM2-216ENST00000488727 ZC3HC1Q86WB0 502 aaKnown RBP19■□□□□ 0.63
CCM2-216ENST00000488727 CILP2Q8IUL8 1156 aa19■□□□□ 0.63
CCM2-216ENST00000488727 C10orf107Q8IVU9 208 aa19■□□□□ 0.63
CCM2-216ENST00000488727 WDR75Q8IWA0 830 aaKnown RBP19■□□□□ 0.63
CCM2-216ENST00000488727 CLDN19Q8N6F1 224 aa19■□□□□ 0.63
CCM2-216ENST00000488727 AGAP11Q8TF27 550 aa19■□□□□ 0.63
CCM2-216ENST00000488727 SGF29Q96ES7 293 aa19■□□□□ 0.63
CCM2-216ENST00000488727 BTBD10Q9BSF8 475 aa19■□□□□ 0.63
CCM2-216ENST00000488727 RMI1Q9H9A7 625 aa19■□□□□ 0.63
CCM2-216ENST00000488727 DNAAF2Q9NVR5 837 aaKnown RBP19■□□□□ 0.63
CCM2-216ENST00000488727 UCKL1Q9NWZ5 548 aa19■□□□□ 0.63
CCM2-216ENST00000488727 ZNHIT2Q9UHR6 403 aa19■□□□□ 0.63
CCM2-216ENST00000488727 PLEKHM1Q9Y4G2 1056 aa19■□□□□ 0.63
CCM2-216ENST00000488727 PRSS21Q9Y6M0 314 aa19■□□□□ 0.63
CCM2-216ENST00000488727 GRID2O43424 1007 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 ITM2AO43736 263 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 H2AFYO75367 372 aaKnown RBP18.99■□□□□ 0.63
CCM2-216ENST00000488727 C2P06681 752 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 APOA4P06727 396 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 OGNP20774 298 aaKnown RBP18.99■□□□□ 0.63
CCM2-216ENST00000488727 KCNA4P22459 653 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 SLC1A2P43004 574 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 TTPAP49638 278 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 CCT8P50990 548 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 CTBP1Q13363 440 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 C1orf61Q13536 156 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 PRRT3Q5FWE3 981 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 LYPLAL1Q5VWZ2 237 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 KANSL1Q7Z3B3 1105 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 GALNT13Q8IUC8 556 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 PLD6Q8N2A8 252 aaKnown RBP18.99■□□□□ 0.63
CCM2-216ENST00000488727 FAM13CQ8NE31 585 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 ZNF548Q8NEK5 533 aaPredicted RBP18.99■□□□□ 0.63
CCM2-216ENST00000488727 CCL4L1Q8NHW4 92 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 DCUN1D1Q96GG9 259 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 OR2M4Q96R27 311 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 MIPEPQ99797 713 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 CLPBQ9H078 707 aa18.99■□□□□ 0.63
CCM2-216ENST00000488727 H3BM21 787 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 RALBP11234 206 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 ATP1B2P14415 290 aaPredicted RBP18.98■□□□□ 0.63
CCM2-216ENST00000488727 DGKAP23743 735 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 ABCE1P61221 599 aaKnown RBP18.98■□□□□ 0.63
CCM2-216ENST00000488727 GTF2H3Q13889 308 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 ZNF789Q5FWF6 425 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 TMEM220Q6QAJ8 160 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 C11orf96Q7Z7L8 435 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 GATAD2AQ86YP4 633 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 TRAPPC5Q8IUR0 188 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 SLC25A45Q8N413 288 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 BEND7Q8N7W2 519 aaPredicted RBP18.98■□□□□ 0.63
CCM2-216ENST00000488727 RDH11Q8TC12 318 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 SAP25Q8TEE9 199 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 PPP4R1Q8TF05 950 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 HEXDCQ8WVB3 486 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 SORT1Q99523 831 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 FAM167BQ9BTA0 163 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 TMEM9BQ9NQ34 198 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 DNAJC16Q9Y2G8 782 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 GPSM3Q9Y4H4 160 aa18.98■□□□□ 0.63
CCM2-216ENST00000488727 ASCC3Q8N3C0 2202 aaKnown RBP18.98■□□□□ 0.63
CCM2-216ENST00000488727 TMEM114B3SHH9 223 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 CFAP99D6REC4 459 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 FOXD2O60548 495 aaPredicted RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 S1PR4O95977 384 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 SERPINA6P08185 405 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 PMLP29590 882 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 NSG1P42857 185 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 PLA2G4EQ3MJ16 856 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 CHST15Q7LFX5 561 aaPredicted RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 SDCCAG8Q86SQ7 713 aaPredicted RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 LRRTM4Q86VH4 590 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 LMNTD2Q8IXW0 634 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 CALML6Q8TD86 181 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 LMX1AQ8TE12 382 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 ATXN7L3BQ96GX2 97 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 TTC1Q99614 292 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 TRNAU1APQ9NX07 287 aaKnown RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 MARCOQ9UEW3 520 aaPredicted RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 ARID1BQ8NFD5 2236 aaPredicted RBP18.97■□□□□ 0.63
CCM2-216ENST00000488727 G3V2L1 256 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 YKT6O15498 198 aa18.97■□□□□ 0.63
CCM2-216ENST00000488727 AQP9O43315 295 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms