RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TCOF1Q13428 1488 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 A6NL46 340 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 H0YIN7 160 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ADAM20O43506 726 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ATP8B1O43520 1251 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 XPNPEP2O43895 674 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 DKC1O60832 514 aaKnown RBP eCLIP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 KRT36O76013 467 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 MBD3O95983 291 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 CRYAAP02489 173 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 RPN1P04843 607 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ADRB2P07550 413 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ABCB1P08183 1280 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF853P0CG23 659 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 PRLRP16471 622 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF23P17027 643 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 GJA1P17302 382 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 U2AF2P26368 475 aaKnown RBP eCLIP3.69□□□□□ -1.824e-10■□□□□ 9.7
ECHDC1-217ENST00000488087 TNNT3P45378 269 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ARCN1P48444 511 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 NUCB2P80303 420 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ROR1Q01973 937 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 PLA2G7Q13093 441 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 RASA2Q15283 850 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 KLHL22Q53GT1 634 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ASPRV1Q53RT3 343 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 FAM76BQ5HYJ3 339 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ALS2CLQ60I27 953 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 DHRS7BQ6IAN0 325 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 HAUS6Q7Z4H7 955 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 LONP2Q86WA8 852 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 NBPF5PQ86XG9 351 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 POGLUT1Q8NBL1 392 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 SEMA4DQ92854 862 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 ABHD8Q96I13 439 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 GCNAQ96QF7 691 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 SPATC1LQ9H0A9 340 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 MMP27Q9H306 513 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 RABEP2Q9H5N1 569 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 SH3GLB2Q9NR46 395 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 LARSQ9P2J5 1176 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 RSPH14Q9UHP6 348 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 SMARCA4P51532 1647 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 KIF14Q15058 1648 aa3.69□□□□□ -1.82
ECHDC1-217ENST00000488087 SCN5AQ14524 2016 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 A0A1B0GUL7 405 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 hCG_1809904A0A1W2PP81 198 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 A0A1W2PPE2 198 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 A0A1W2PR64 198 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 OR2M5A3KFT3 312 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 IPO8O15397 1037 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 BAG4O95429 457 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 BCL10O95999 233 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 TFAP2AP05549 437 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 LIPFP07098 398 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 CSF2RAP15509 400 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 GM2AP17900 193 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 TRIM21P19474 475 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 EEF1DP29692 281 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 PSMC4P43686 418 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 CAPZA2P47755 286 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 HOXA1P49639 335 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 UBXN2AP68543 259 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 SIRPAP78324 504 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 NCBP1Q09161 790 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 AIMP1Q12904 312 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 GRAPQ13588 217 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 ACCSLQ4AC99 568 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 C9orf152Q5JTZ5 239 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 SLC10A5Q5PT55 438 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 NDUFAF5Q5TEU4 345 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 ADALQ6DHV7 355 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 GAGE2AQ6NT46 116 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 CASC1Q6TDU7 716 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 PACS1Q6VY07 963 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 LDB1Q86U70 411 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 GUF1Q8N442 669 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 FBXO39Q8N4B4 442 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 OTUD6BQ8N6M0 293 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 CCDC191Q8NCU4 936 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 RBM15BQ8NDT2 890 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 ZNF397Q8NF99 534 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 KIAA1524Q8TCG1 905 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 ITFG2Q969R8 447 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 TMCO6Q96DC7 493 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 CNDP2Q96KP4 475 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 FAM81BQ96LP2 452 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 INPP4AQ96PE3 977 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 CDRT15Q96T59 188 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 BAG1Q99933 345 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 KLHL4Q9C0H6 718 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 TCF7L2Q9NQB0 619 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 MIOSQ9NXC5 875 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 TAAR2Q9P1P5 351 aa3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 NFKBIL1Q9UBC1 381 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-217ENST00000488087 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms