RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 NENFQ9UMX5 172 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 WDR37Q9Y2I8 494 aa3.37□□□□□ -1.87
CCDC66-221ENST00000487739 AGRNO00468 2067 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 LOC101059948A0A1B0GTJ6 334 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 LIPT2A6NK58 231 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 E9PI62 339 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 HS6ST1O60243 411 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 TMEM63AO94886 807 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 HNF4AP41235 474 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 PPP2R2BQ00005 443 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 MS4A2Q01362 244 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 TSTQ16762 297 aaKnown RBP3.36□□□□□ -1.87
CCDC66-221ENST00000487739 TAF1BQ53T94 588 aaPredicted RBP3.36□□□□□ -1.87
CCDC66-221ENST00000487739 WLSQ5T9L3 541 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 GKAP1Q5VSY0 366 aaPredicted RBP3.36□□□□□ -1.87
CCDC66-221ENST00000487739 JADE1Q6IE81 842 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 FIP1L1Q6UN15 594 aaKnown RBP3.36□□□□□ -1.87
CCDC66-221ENST00000487739 PPFIBP2Q8ND30 876 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 TBC1D16Q8TBP0 767 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 RFFLQ8WZ73 363 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 TBATAQ96M53 351 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 USP28Q96RU2 1077 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 C1QTNF1Q9BXJ1 281 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 UPF3AQ9H1J1 476 aaKnown RBP3.36□□□□□ -1.87
CCDC66-221ENST00000487739 TAB2Q9NYJ8 693 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 RIPK3Q9Y572 518 aa3.36□□□□□ -1.87
CCDC66-221ENST00000487739 PRSS51A0A1B0GVH4 220 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 RTN3O95197 1032 aaPredicted RBP3.35□□□□□ -1.87
CCDC66-221ENST00000487739 CLDN1O95832 211 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 GPIP06744 558 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 ATP1A3P13637 1013 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 CA6P23280 308 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 NMBRP28336 390 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 PTGER3P43115 390 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 CAMPP49913 170 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 HUNKP57058 714 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 GSDMDP57764 484 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 DRP2Q13474 957 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 NECTIN1Q15223 517 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 ASTE1Q2TB18 679 aaPredicted RBP3.35□□□□□ -1.87
CCDC66-221ENST00000487739 TMEM95Q3KNT9 176 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 LACC1Q8IV20 430 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 DCLK2Q8N568 766 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 PDILTQ8N807 584 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 NIPA2Q8N8Q9 360 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 OR2L2Q8NH16 312 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 OLIG1Q8TAK6 271 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 FAM81BQ96LP2 452 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 SH2D4AQ9H788 454 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 AMACRQ9UHK6 382 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 OSGIN1Q9UJX0 560 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 TMEM98Q9Y2Y6 226 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 CMAHPQ9Y471 501 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 LYVE1Q9Y5Y7 322 aa3.35□□□□□ -1.87
CCDC66-221ENST00000487739 A0A1B0GVC2 190 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 A0A1W2PNU3 283 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-221ENST00000487739 MSGN1A6NI15 193 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 A8MZ25 164 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 CA4P22748 312 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 PRAMEP78395 509 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 CX3CL1P78423 397 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 ELAVL2Q12926 359 aaKnown RBP3.34□□□□□ -1.87
CCDC66-221ENST00000487739 IKQ13123 557 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-221ENST00000487739 E2F5Q15329 346 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 INTS11Q5TA45 600 aaKnown RBP3.34□□□□□ -1.87
CCDC66-221ENST00000487739 TICAM1Q8IUC6 712 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 TEX11Q8IYF3 940 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 ZFAND2BQ8WV99 257 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 SEC62Q99442 399 aaKnown RBP3.34□□□□□ -1.87
CCDC66-221ENST00000487739 WWTR1Q9GZV5 400 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 EPHA6Q9UF33 1036 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 FBXL17Q9UF56 701 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 ZDHHC2Q9UIJ5 367 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.34□□□□□ -1.87
CCDC66-221ENST00000487739 PCDHGA5Q9Y5G8 931 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 SESN1Q9Y6P5 492 aa3.34□□□□□ -1.87
CCDC66-221ENST00000487739 SOS1Q07889 1333 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-221ENST00000487739 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
CCDC66-221ENST00000487739 TPD52L2O43399 206 aaKnown RBP3.33□□□□□ -1.88
CCDC66-221ENST00000487739 DDX58O95786 925 aaKnown RBP3.33□□□□□ -1.88
CCDC66-221ENST00000487739 HERV-K104P61576 105 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 PNRC1Q12796 327 aaPredicted RBP3.33□□□□□ -1.88
CCDC66-221ENST00000487739 PEX6Q13608 980 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 KRTAP13-3Q3SY46 172 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 GRTP1Q5TC63 336 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 GPRIN3Q6ZVF9 776 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 HOGA1Q86XE5 327 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 SCYL3Q8IZE3 742 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 LINC00612Q8N6U2 182 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 RNF128Q8TEB7 428 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 DGCR6LQ9BY27 220 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 VN1R1Q9GZP7 353 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 A4GALTQ9NPC4 353 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 DIAPH3Q9NSV4 1193 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 NUDT4Q9NZJ9 180 aa3.33□□□□□ -1.88
CCDC66-221ENST00000487739 A8MU10 97 aa3.32□□□□□ -1.88
CCDC66-221ENST00000487739 TO15178 435 aa3.32□□□□□ -1.88
CCDC66-221ENST00000487739 ZSCAN5DPP0CG00 497 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms