RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 HTR6P50406 440 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 HPCAP84074 193 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 TTLL9Q3SXZ7 439 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 SULT1C3Q6IMI6 304 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 IL27RAQ6UWB1 636 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 FKBP9P1Q75LS8 142 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 OR4F6Q8NGB9 312 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 OR8J3Q8NGG0 315 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 PPP3R2Q96LZ3 170 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 CGREF1Q99674 301 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 BOCQ9BWV1 1114 aa25.63■■□□□ 1.69
HLA-C-208ENST00000487245 ARL1P40616 181 aaPredicted RBP25.62■■□□□ 1.69
HLA-C-208ENST00000487245 TRAF3Q13114 568 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 KIAA0040Q15053 153 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 CHRNA6Q15825 494 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 GPRC6AQ5T6X5 926 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 GLYATQ6IB77 296 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 CCDC149Q6ZUS6 474 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 MILR1Q7Z6M3 343 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 TMC8Q8IU68 726 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 CCDC115Q96NT0 180 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 CDK15Q96Q40 435 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 CHID1Q9BWS9 393 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 RDH14Q9HBH5 336 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 CCL27Q9Y4X3 112 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 TRIM16O95361 564 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 HMOX2P30519 316 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 CASP2P42575 452 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 DEFB103AP81534 67 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 TPGS1Q6ZTW0 290 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 NXPE1Q8N323 547 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 TTC16Q8NEE8 873 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 UBTD2Q8WUN7 234 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 CYGBQ8WWM9 190 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 IPPKQ9H8X2 491 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 PPIL1Q9Y3C6 166 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 PRSS21Q9Y6M0 314 aa25.62■■□□□ 1.69
HLA-C-208ENST00000487245 SCN8AQ9UQD0 1980 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 ZNF821O75541 412 aaPredicted RBP25.61■■□□□ 1.69
HLA-C-208ENST00000487245 CBSLP0DN79 551 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 G6PDP11413 515 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 CD70P32970 193 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 CBSP35520 551 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 LRRC23Q53EV4 343 aaPredicted RBP25.61■■□□□ 1.69
HLA-C-208ENST00000487245 DGKKQ5KSL6 1271 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 TPRG1Q6ZUI0 275 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 ELMOD1Q8N336 334 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 GAB3Q8WWW8 586 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 C17orf80Q9BSJ5 609 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 TNKS2Q9H2K2 1166 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 ANGPTL3Q9Y5C1 460 aa25.61■■□□□ 1.69
HLA-C-208ENST00000487245 AGAP14A8MT82 685 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 TGM5O43548 720 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 ITGB6P18564 788 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 GGT1P19440 569 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 UGT1A1P22309 533 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 UGT1A4P22310 534 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 VARSP26640 1264 aaKnown RBP25.6■■□□□ 1.69
HLA-C-208ENST00000487245 UGT1A3P35503 534 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 UGT1A5P35504 534 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 BIRC2Q13490 618 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 NR6A1Q15406 480 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 TTC23LQ6PF05 361 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 HS6ST3Q8IZP7 471 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 LKAAEAR1Q8TD35 194 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 EZH1Q92800 747 aaPredicted RBP25.6■■□□□ 1.69
HLA-C-208ENST00000487245 NPLQ9BXD5 320 aaPredicted RBP25.6■■□□□ 1.69
HLA-C-208ENST00000487245 ZBP1Q9H171 429 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 CIDEBQ9UHD4 219 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 USP22Q9UPT9 525 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 ATP11BQ9Y2G3 1177 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 NEUROG3Q9Y4Z2 214 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 DENND4CQ5VZ89 1909 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 WDR47O94967 919 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 ANXA6P08133 673 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 CTSAP10619 480 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 GKP32189 559 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 MNX1P50219 401 aaPredicted RBP25.6■■□□□ 1.69
HLA-C-208ENST00000487245 MAD2L1Q13257 205 aaPredicted RBP25.6■■□□□ 1.69
HLA-C-208ENST00000487245 DCTN2Q13561 401 aaKnown RBP25.6■■□□□ 1.69
HLA-C-208ENST00000487245 AP5B1Q2VPB7 878 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 CDKL4Q5MAI5 379 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 ZDHHC20Q5W0Z9 365 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 TMCO2Q7Z6W1 182 aaPredicted RBP25.6■■□□□ 1.69
HLA-C-208ENST00000487245 SCRN2Q96FV2 425 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 FBXL20Q96IG2 436 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 EGFL8Q99944 293 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 CD244Q9BZW8 370 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 KCTD5Q9NXV2 234 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 ASIC5Q9NY37 505 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 INTS6Q9UL03 887 aaKnown RBP25.6■■□□□ 1.69
HLA-C-208ENST00000487245 CDH7Q9ULB5 785 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 CLEC4EQ9ULY5 219 aa25.6■■□□□ 1.69
HLA-C-208ENST00000487245 LEFTY2O00292 366 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 TAPBPO15533 448 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 CNPP09543 421 aaKnown RBP25.59■■□□□ 1.69
HLA-C-208ENST00000487245 RAP2AP10114 183 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 SRCP12931 536 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 CA5AP35218 305 aa25.59■■□□□ 1.69
HLA-C-208ENST00000487245 NSG1P42857 185 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms