RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 IL1RAPL1Q9NZN1 696 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 FOXJ2Q9P0K8 574 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 KLHL3Q9UH77 587 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 PCDHGA8Q9Y5G5 932 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 OR5K4A6NMS3 321 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 IQCF5A8MTL0 148 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 C9orf172C9J069 976 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 GOLGA8KD6RF30 607 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 GOLGA8TH3BQL2 631 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 CES2O00748 559 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 KIF1CO43896 1103 aaKnown RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 UBXN7O94888 489 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 SLC35G4P0C7Q5 338 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 JMJD7P0C870 316 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 RALBP11234 206 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 FGF3P11487 239 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 TCP1P17987 556 aaKnown RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 ITGB6P18564 788 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 RBMS1P29558 406 aaKnown RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 SLC5A2P31639 672 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 HALP42357 657 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 CAPZBP47756 277 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 FNTAP49354 379 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 MAPK10P53779 464 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 PCBP4P57723 403 aaKnown RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 PRAMEP78395 509 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 TLE3Q04726 772 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 SRSF6Q13247 344 aaKnown RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 BRD3Q15059 726 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 TGIF1Q15583 401 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 COL28A1Q2UY09 1125 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 PCID2Q5JVF3 399 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 PAPD7Q5XG87 772 aaKnown RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 CAPRIN2Q6IMN6 1127 aaKnown RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 TMEM71Q6P5X7 295 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 LRRC8BQ6P9F7 803 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 WDR74Q6RFH5 385 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 C4orf22Q6V702 233 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 PACS1Q6VY07 963 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 JAMLQ86YT9 394 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 SPACA3Q8IXA5 215 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 CFAP206Q8IYR0 622 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 OR4L1Q8NH43 312 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 HM13Q8TCT9 377 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 USP7Q93009 1102 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 SH3KBP1Q96B97 665 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 RNF31Q96EP0 1072 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 C12orf66Q96MD2 445 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 ZNF578Q96N58 590 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 TGM7Q96PF1 710 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 NAP1L3Q99457 506 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 NAPGQ99747 312 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 CCM2Q9BSQ5 444 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 KIFC1Q9BW19 673 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 IL22Q9GZX6 179 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 OR52A5Q9H2C5 316 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 STN1Q9H668 368 aaKnown RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 COG4Q9H9E3 785 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 UCK1Q9HA47 277 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 THSD1Q9NS62 852 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 OCIAD1Q9NX40 245 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 PDP2Q9P2J9 529 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 RIMKLBQ9ULI2 386 aa6.99□□□□□ -1.29
UBE4B-209ENST00000487244 GPC6Q9Y625 555 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 DNMT3AQ9Y6K1 912 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 MN1Q10571 1320 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-209ENST00000487244 PIEZO2Q9H5I5 2752 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ANKRD12Q6UB98 2062 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 GOLGA6L10A0A0M3HER8 536 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 CTAGE9A4FU28 777 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 EFCAB7A8K855 629 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 TMX2-CTNND1H3BSU7 103 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 HGSO14964 777 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 CD3EAPO15446 510 aaKnown RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ZW10O43264 779 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 KCNJ13O60928 360 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 BANF1O75531 89 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 VAPBO95292 243 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 NSG1P42857 185 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 MAGEA3P43357 314 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ARCN1P48444 511 aaKnown RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 NPY2RP49146 381 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 CSE1LP55060 971 aaKnown RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ERVPABLB-1P60509 514 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 CDK16Q00536 496 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 TNP2Q05952 138 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 EIF3IQ13347 325 aaKnown RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 LAMB3Q13751 1172 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 PTK6Q13882 451 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 BOP1Q14137 746 aaKnown RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ITIH4Q14624 930 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 CLPPQ16740 277 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 RNASEH2BQ5TBB1 312 aaKnown RBP6.98□□□□□ -1.29
UBE4B-209ENST00000487244 LRRC69Q6ZNQ3 347 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 FAM92BQ6ZTR7 304 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 NLRP9Q7RTR0 991 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ARHGAP22Q7Z5H3 698 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 ZFAND4Q86XD8 727 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 FAM129CQ86XR2 697 aa6.98□□□□□ -1.29
UBE4B-209ENST00000487244 KLHL7Q8IXQ5 586 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms