RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 NOVA1P51513 510 aaKnown RBP18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 TAS2R39P59534 338 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 PDAP1Q13442 181 aaKnown RBP18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 BIRC2Q13490 618 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 UAP1Q16222 522 aaPredicted RBP18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 MAP9Q49MG5 647 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 ACSBG2Q5FVE4 666 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 LRRC8EQ6NSJ5 796 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 TRIM48Q8IWZ4 208 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 MREGQ8N565 214 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 ACVR1CQ8NER5 493 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 UHMK1Q8TAS1 419 aaKnown RBP18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 IFI44Q8TCB0 444 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 PAFAH2Q99487 392 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 CCDC77Q9BR77 488 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 DHRS4Q9BTZ2 278 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 MVB12BQ9H7P6 319 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 IMP3Q9NV31 184 aaKnown RBP18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 GOLGA4Q13439 2230 aaKnown RBP18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 RHPN2P1A8MT19 583 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 POC1B-GALNT4F8VUJ3 575 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 ZW10O43264 779 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 CTIFO43310 598 aaKnown RBP18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 MATN4O95460 622 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 INHBAP08476 426 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 MPC1LP0DKB6 136 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 HSD17B3P37058 310 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 RGS4P49798 205 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 SERPINB9P50453 376 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 PERM1Q5SV97 790 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 PAQR3Q6TCH7 311 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 UNC5DQ6UXZ4 953 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 CYHR1Q6ZMK1 362 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 TMEM26Q6ZUK4 368 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 TBC1D21Q8IYX1 336 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 CCDC74AQ96AQ1 378 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 TSPAN17Q96FV3 270 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 PDLIM5Q96HC4 596 aaKnown RBP18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 SYTL2Q9HCH5 934 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 CFAP20Q9Y6A4 193 aaKnown RBP18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 IKBKGQ9Y6K9 419 aa18.9■□□□□ 0.62
PCOLCE-208ENST00000487172 HMX2A2RU54 273 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 DCDC2BA2VCK2 349 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 LILRA5A6NI73 299 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 WISP3O95389 354 aaPredicted RBP18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 CNTFP26441 200 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 GCAP28676 217 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 MAPK9P45984 424 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 SLC12A2P55011 1212 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 E2F1Q01094 437 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 ABRQ12979 859 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 USP10Q14694 798 aaKnown RBP18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 ZKSCAN8Q15776 578 aaPredicted RBP18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 ADGRD1Q6QNK2 874 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 PIM3Q86V86 326 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 CPNE9Q8IYJ1 553 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 DCAKDQ8WVC6 231 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 MRRFQ96E11 262 aaKnown RBP18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 FOPNLQ96NB1 174 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 FERD3LQ96RJ6 166 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 SLC38A3Q99624 504 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 CCDC3Q9BQI4 270 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 PPCSQ9HAB8 311 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 SLC24A2Q9UI40 661 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 SLC39A10Q9ULF5 831 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 APOBEC2Q9Y235 224 aaKnown RBP18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 ASF1AQ9Y294 204 aa18.89■□□□□ 0.61
PCOLCE-208ENST00000487172 PRAMEF33A0A0G2JMD5 474 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 CCDC151A5D8V7 595 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 GIPC1O14908 333 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 RFPL3O75679 317 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 RPN2P04844 631 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 STMN1P16949 149 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 SAT1P21673 171 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 EPHA4P54764 986 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 IL2P60568 153 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 SIM1P81133 766 aaPredicted RBP18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 KRT33BQ14525 404 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 LGSNQ5TDP6 509 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 DUS1LQ6P1R4 473 aaKnown RBP18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 SLCO6A1Q86UG4 719 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 RASGRP3Q8IV61 690 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 CEP97Q8IW35 865 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 OR5K2Q8NHB8 316 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 WDR48Q8TAF3 677 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 TRIT1Q9H3H1 467 aaKnown RBP18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 KIR3DX1Q9H7L2 352 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 POLG2Q9UHN1 485 aa18.88■□□□□ 0.61
PCOLCE-208ENST00000487172 SPAARA0A1B0GVQ0 90 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 B4GAT1O43505 415 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 PSIP1O75475 530 aaKnown RBP18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 ERLIN1O75477 346 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 KRT38O76015 456 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 NUDT17P0C025 328 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 FTH1P19P0C7X4 201 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 ZNF37AP17032 561 aaPredicted RBP18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 CSRP3P50461 194 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 RAB10P61026 200 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 GPLD1P80108 840 aa18.87■□□□□ 0.61
PCOLCE-208ENST00000487172 SQSTM1Q13501 440 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms