RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 CHCHD4Q8N4Q1 142 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 RTL3Q8N8U3 475 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 GLB1L3Q8NCI6 653 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 OR2T29Q8NH02 315 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ATL1Q8WXF7 558 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 KCTD13Q8WZ19 329 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 UHRF1Q96T88 793 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SEPT5Q99719 369 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 TMEM246Q9BRR3 403 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CCDC177Q9NQR7 707 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ING3Q9NXR8 418 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CFL2Q9Y281 166 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 KCTD3Q9Y597 815 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ARL5AQ9Y689 179 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 IGKV6D-21A0A0A0MT36 114 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 MOXD2PA6NHM9 499 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 F8W810 466 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SEC14L2O76054 403 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 POMCP01189 267 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 YES1P07947 543 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 OGNP20774 298 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 WARSP23381 471 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 HTR1BP28222 390 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CD40LGP29965 261 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 IDUAP35475 653 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 GNG2P59768 71 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 PURAQ00577 322 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 EMX2Q04743 252 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF33AQ06730 810 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 GRIK2Q13002 908 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF177Q13360 481 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZZZ3Q8IYH5 903 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 DTWD1Q8N5C7 304 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 GPRC5AQ8NFJ5 357 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 WDR36Q8NI36 951 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 NELL1Q92832 810 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 KIAA1191Q96A73 305 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZFP42Q96MM3 310 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF641Q96N77 438 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 NFKBIZQ9BYH8 718 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 HDHD2Q9H0R4 259 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ARL15Q9NXU5 204 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 MAP10Q9P2G4 905 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 UBA2Q9UBT2 640 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ATAD5Q96QE3 1844 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 UNCXA6NJT0 531 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 DFNA5O60443 496 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SULT1C4O75897 302 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 DIRAS1O95057 198 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CD1DP15813 335 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 XPAP23025 273 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 DGKAP23743 735 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 FOXA1P55317 472 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 MADCAM1Q13477 382 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 GTF2H2Q13888 395 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 HIST2H2ACQ16777 129 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 GTF2H2CQ6P1K8 395 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 TUBA3EQ6PEY2 450 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ELMSAN1Q6PJG2 1045 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 DSG4Q86SJ6 1040 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 EPHX4Q8IUS5 362 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 FUNDC1Q8IVP5 155 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 HS3ST5Q8IZT8 346 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 UBE2J2Q8N2K1 259 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 MTMR14Q8NCE2 650 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CHDHQ8NE62 594 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SLC38A4Q969I6 547 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 PSMG2Q969U7 264 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 L3HYPDHQ96EM0 354 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 HMCESQ96FZ2 354 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 PHOX2BQ99453 314 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 BCL7BQ9BQE9 202 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ATP13A3Q9H7F0 1226 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 INIPQ9NRY2 104 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SSR3Q9UNL2 185 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SMCHD1A6NHR9 2005 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CITO14578 2027 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 NHSQ6T4R5 1651 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 A0A1W2PQ72 361 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 TTC24A2A3L6 582 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 PPP6CO00743 305 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SH3BGRLO75368 114 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 PRKCGP05129 697 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 PSMA1P25786 263 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 DNAJA1P31689 397 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 HTR7P34969 479 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CCT3P49368 545 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CDKN2DP55273 166 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SPIBQ01892 262 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ACSM2AQ08AH3 577 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SLC10A7Q0GE19 358 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 UBE2UQ5VVX9 321 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ACSM2BQ68CK6 577 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 ENPP6Q6UWR7 440 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SIDT2Q8NBJ9 832 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 BRSK1Q8TDC3 778 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 FRS2Q8WU20 508 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CLIP3Q96DZ5 547 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms