RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 ACVR1CQ8NER5 493 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 RSC1A1Q92681 617 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 TFGQ92734 400 aaPredicted RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 CERS2Q96G23 380 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 AHCYL2Q96HN2 611 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 CCDC74BQ96LY2 380 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 SLC46A1Q96NT5 459 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 TFB2MQ9H5Q4 396 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 CCDC86Q9H6F5 360 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 SYNDIG1Q9H7V2 258 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 C20orf96Q9NUD7 363 aaPredicted RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 IMP3Q9NV31 184 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 TMEM9Q9P0T7 183 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 FAM8A1Q9UBU6 413 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 ZC3H7BQ9UGR2 993 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 ACSL6Q9UKU0 697 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 SATB2Q9UPW6 733 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 UTP11Q9Y3A2 253 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 CFAP20Q9Y6A4 193 aaKnown RBP12.83□□□□□ -0.36
SF1-216ENST00000486867 COMMD10Q9Y6G5 202 aa12.83□□□□□ -0.36
SF1-216ENST00000486867 UBA6A0AVT1 1052 aaPredicted RBP12.82□□□□□ -0.36
SF1-216ENST00000486867 TAF4O00268 1085 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 BRINP1O60477 761 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 APOA4P06727 396 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 ITGA2BP08514 1039 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 PKMP14618 531 aaKnown RBP12.82□□□□□ -0.36
SF1-216ENST00000486867 CD9P21926 228 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 EIF3BP55884 814 aaKnown RBP12.82□□□□□ -0.36
SF1-216ENST00000486867 CYP4F3Q08477 520 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 CALCOCO2Q13137 446 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 CTBP1Q13363 440 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 FASTKD3Q14CZ7 662 aaKnown RBP12.82□□□□□ -0.36
SF1-216ENST00000486867 HSP90AA5PQ58FG0 334 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 PTRHD1Q6GMV3 140 aaKnown RBP12.82□□□□□ -0.36
SF1-216ENST00000486867 ZNF549Q6P9A3 640 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 KLHL35Q6PF15 583 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 CYS1Q717R9 158 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 PRSS42Q7Z5A4 293 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 PROSER1Q86XN7 944 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 RASGRP3Q8IV61 690 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 VRK3Q8IV63 474 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 TBC1D21Q8IYX1 336 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 CARFQ8N187 725 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 KRT222Q8N1A0 295 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 BMPERQ8N8U9 685 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 SNIP1Q8TAD8 396 aaKnown RBP12.82□□□□□ -0.36
SF1-216ENST00000486867 MDM1Q8TC05 714 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 ZCCHC14Q8WYQ9 949 aaKnown RBP12.82□□□□□ -0.36
SF1-216ENST00000486867 KCNJ9Q92806 393 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 FAM129AQ9BZQ8 928 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 DPH5Q9H2P9 285 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 MOCS1Q9NZB8 636 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 CHMP2BQ9UQN3 213 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 PCDHGA7Q9Y5G6 932 aa12.82□□□□□ -0.36
SF1-216ENST00000486867 PMS2P1A4D2B8 440 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 OR5K3A6NET4 321 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 NIPSNAP2O75323 286 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 MPOP05164 745 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 TPBGLP0DKB5 382 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 ERVK-10P10266 1014 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 GABRB3P28472 473 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 CLCN7P51798 805 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 PDIA2Q13087 525 aaKnown RBP12.81□□□□□ -0.36
SF1-216ENST00000486867 TMED2Q15363 201 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 TBC1D25Q3MII6 688 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 C3orf38Q5JPI3 329 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 TEDDM1Q5T9Z0 273 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 C8orf74Q6P047 294 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 UNC5DQ6UXZ4 953 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 OTUD6BQ8N6M0 293 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 NOA1Q8NC60 698 aaKnown RBP12.81□□□□□ -0.36
SF1-216ENST00000486867 AGBL5Q8NDL9 886 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 OR5K2Q8NHB8 316 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 GABPB2Q8TAK5 448 aaPredicted RBP12.81□□□□□ -0.36
SF1-216ENST00000486867 FBXO25Q8TCJ0 367 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 NCSTNQ92542 709 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 ZNF592Q92610 1267 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 ZNF578Q96N58 590 aaPredicted RBP12.81□□□□□ -0.36
SF1-216ENST00000486867 CD180Q99467 661 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 CMKLR1Q99788 373 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 LRRC1Q9BTT6 524 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 MENTQ9BUN1 341 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 ZDHHC18Q9NUE0 388 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 SIDT1Q9NXL6 827 aaKnown RBP12.81□□□□□ -0.36
SF1-216ENST00000486867 POLG2Q9UHN1 485 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 CORO1CQ9ULV4 474 aaPredicted RBP12.81□□□□□ -0.36
SF1-216ENST00000486867 CRYL1Q9Y2S2 319 aa12.81□□□□□ -0.36
SF1-216ENST00000486867 MDC1Q14676 2089 aaKnown RBP12.81□□□□□ -0.36
SF1-216ENST00000486867 B4E171 279 aa12.8□□□□□ -0.36
SF1-216ENST00000486867 EIF3FO00303 357 aaPredicted RBP12.8□□□□□ -0.36
SF1-216ENST00000486867 NVLO15381 856 aaKnown RBP12.8□□□□□ -0.36
SF1-216ENST00000486867 CAPN5O15484 640 aaPredicted RBP12.8□□□□□ -0.36
SF1-216ENST00000486867 HAUS5O94927 633 aa12.8□□□□□ -0.36
SF1-216ENST00000486867 MATN4O95460 622 aa12.8□□□□□ -0.36
SF1-216ENST00000486867 C1QAP02745 245 aa12.8□□□□□ -0.36
SF1-216ENST00000486867 TYRP1P17643 537 aa12.8□□□□□ -0.36
SF1-216ENST00000486867 AMD1P17707 334 aa12.8□□□□□ -0.36
SF1-216ENST00000486867 ITGB6P18564 788 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms