RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 OR4E2Q8NGC2 313 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 OR52E1Q8NGJ3 308 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 OR5AR1Q8NGP9 310 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 CFAP61Q8NHU2 1237 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 KCNE4Q8WWG9 221 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 LPGAT1Q92604 370 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 CFAP36Q96G28 342 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 CRELD1Q96HD1 420 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 CTRCQ99895 268 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 XKR8Q9H6D3 395 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 FBXO6Q9NRD1 293 aaPredicted RBP15.81■□□□□ 0.12
DDR1-246ENST00000485023 HRASLS2Q9NWW9 162 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 PDP2Q9P2J9 529 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 CHMP2BQ9UQN3 213 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 ASF1AQ9Y294 204 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 CFAP47Q6ZTR5 3102 aa15.81■□□□□ 0.12
DDR1-246ENST00000485023 UNC13CQ8NB66 2214 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 CELSR3Q9NYQ7 3312 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 OR5K3A6NET4 321 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 C9orf172C9J069 976 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 BHMG1C9JSJ3 638 aaPredicted RBP15.8■□□□□ 0.12
DDR1-246ENST00000485023 RAD51CO43502 376 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 USP1O94782 785 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 SEC31AO94979 1220 aaKnown RBP15.8■□□□□ 0.12
DDR1-246ENST00000485023 C9P02748 559 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 POLR2CP19387 275 aaPredicted RBP15.8■□□□□ 0.12
DDR1-246ENST00000485023 OGNP20774 298 aaKnown RBP15.8■□□□□ 0.12
DDR1-246ENST00000485023 SLC1A2P43004 574 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 CD151P48509 253 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 CTBP1Q13363 440 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 CRYMQ14894 314 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 TMED2Q15363 201 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 LONRF1Q17RB8 773 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 RNF187Q5TA31 235 aaPredicted RBP15.8■□□□□ 0.12
DDR1-246ENST00000485023 CACHD1Q5VU97 1274 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 HIBCHQ6NVY1 386 aaPredicted RBP15.8■□□□□ 0.12
DDR1-246ENST00000485023 ARMC6Q6NXE6 501 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 KLHL35Q6PF15 583 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 OOSP2Q86WS3 158 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 CILP2Q8IUL8 1156 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 IGDCC3Q8IVU1 814 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 ACVR1CQ8NER5 493 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 LCN9Q8WX39 176 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 ZDHHC12Q96GR4 267 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 CARD6Q9BX69 1037 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 SLC39A1Q9NY26 324 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.8■□□□□ 0.12
DDR1-246ENST00000485023 CIDEBQ9UHD4 219 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 PLAGL1Q9UM63 463 aa15.8■□□□□ 0.12
DDR1-246ENST00000485023 TDRKHQ9Y2W6 561 aaKnown RBP15.8■□□□□ 0.12
DDR1-246ENST00000485023 APC2O95996 2303 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 DMXL2Q8TDJ6 3036 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 A0A087WV48 116 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 GSAPA4D1B5 854 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 PFDN6O15212 129 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 KLK10O43240 276 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 URI1O94763 535 aaPredicted RBP15.79■□□□□ 0.12
DDR1-246ENST00000485023 APOA4P06727 396 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 RPS3P23396 243 aaKnown RBP eCLIP15.79■□□□□ 0.124e-7■■■□□ 15.2
DDR1-246ENST00000485023 MLLT3P42568 568 aaPredicted RBP15.79■□□□□ 0.12
DDR1-246ENST00000485023 ABCG1P45844 678 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 MPP1Q00013 466 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 ABRQ12979 859 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 HIF1AQ16665 826 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 COL28A1Q2UY09 1125 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 HSP90AA5PQ58FG0 334 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 DNTTIP2Q5QJE6 756 aaKnown RBP15.79■□□□□ 0.12
DDR1-246ENST00000485023 TMEM164Q5U3C3 297 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 ARMC3Q5W041 872 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 ANKS6Q68DC2 871 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 FBXO38Q6PIJ6 1188 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 KCNMB4Q86W47 210 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 LRRC6Q86X45 466 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 ZFAND4Q86XD8 727 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 ANKMY2Q8IV38 441 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 SPNS2Q8IVW8 549 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 SPACA3Q8IXA5 215 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 SLC22A15Q8IZD6 547 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 PDIK1LQ8N165 341 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 SKA2Q8WVK7 121 aaPredicted RBP15.79■□□□□ 0.12
DDR1-246ENST00000485023 ASZ1Q8WWH4 475 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 BIRC8Q96P09 236 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 PANX3Q96QZ0 392 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 EBNA1BP2Q99848 306 aaKnown RBP15.79■□□□□ 0.12
DDR1-246ENST00000485023 TRIT1Q9H3H1 467 aaKnown RBP15.79■□□□□ 0.12
DDR1-246ENST00000485023 SRMSQ9H3Y6 488 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 MVB12BQ9H7P6 319 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 APMAPQ9HDC9 416 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 IARS2Q9NSE4 1012 aaKnown RBP15.79■□□□□ 0.12
DDR1-246ENST00000485023 RUVBL2Q9Y230 463 aaKnown RBP15.79■□□□□ 0.12
DDR1-246ENST00000485023 CDYLQ9Y232 598 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 PCDHGA7Q9Y5G6 932 aa15.79■□□□□ 0.12
DDR1-246ENST00000485023 KNTC1P50748 2209 aa15.78■□□□□ 0.12
DDR1-246ENST00000485023 ZZEF1O43149 2961 aa15.78■□□□□ 0.12
DDR1-246ENST00000485023 ANKRD34CP0C6C1 535 aa15.78■□□□□ 0.12
DDR1-246ENST00000485023 ERVK-10P10266 1014 aa15.78■□□□□ 0.12
DDR1-246ENST00000485023 CHRM3P20309 590 aa15.78■□□□□ 0.12
DDR1-246ENST00000485023 AOAHP28039 575 aa15.78■□□□□ 0.12
DDR1-246ENST00000485023 ACADLP28330 430 aa15.78■□□□□ 0.12
DDR1-246ENST00000485023 ELK3P41970 407 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms