RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 FAM114A1Q8IWE2 563 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 NGEFQ8N5V2 710 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 CPSF7Q8N684 471 aaKnown RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 ANKRD52Q8NB46 1076 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 OR4C3Q8NH37 302 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 MRGPRDQ8TDS7 321 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 HPSE2Q8WWQ2 592 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 POMGNT1Q8WZA1 660 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 ERLEC1Q96DZ1 483 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 DCTN5Q9BTE1 182 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 HHATLQ9HCP6 504 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 SEPT11Q9NVA2 429 aaKnown RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 RNF186Q9NXI6 227 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 A0A1W2PRB8 838 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 ELOVL7A1L3X0 281 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 PGPEP1LA6NFU8 196 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 CREG1O75629 220 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 EDN1P05305 212 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 GPIP06744 558 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 TYMPP19971 482 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 CHMP24386 653 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 PRAMEP78395 509 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 CDR2Q01850 454 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 IRF3Q14653 427 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 MELKQ14680 651 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 ZNF554Q86TJ5 538 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 PIGZQ86VD9 579 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 TICAM1Q8IUC6 712 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 TEX11Q8IYF3 940 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 DCLK2Q8N568 766 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 ZNF614Q8N883 585 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 MAPKAPK5-AS1Q8N8E1 139 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 BMPERQ8N8U9 685 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 SCFD2Q8WU76 684 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 NCAPGQ9BPX3 1015 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 MCRIP2Q9BUT9 160 aaKnown RBP2.81□□□□□ -1.96
VPS50-216ENST00000484954 VN1R1Q9GZP7 353 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 UNC45AQ9H3U1 944 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 RPS10P5Q9NQ39 176 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 KRT84Q9NSB2 600 aa2.81□□□□□ -1.96
VPS50-216ENST00000484954 ASTN2O75129 1339 aaPredicted RBP2.8□□□□□ -1.96
VPS50-216ENST00000484954 A0A087X0M5 115 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 LOC101059948A0A1B0GTJ6 334 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 A0A1B0GX30 115 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 MED19A0JLT2 244 aaPredicted RBP2.8□□□□□ -1.96
VPS50-216ENST00000484954 HEPACAM2A8MVW5 462 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 E9PQ18 207 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 DCXO43602 365 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 CLDN1O95832 211 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 CA4P22748 312 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 HOXC13P31276 330 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 ARL3P36405 182 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 MAMLD1Q13495 774 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 KCNC3Q14003 757 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 SNAI3Q3KNW1 292 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 KLHL26Q53HC5 615 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 TMEM154Q6P9G4 183 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 ZNF613Q6PF04 617 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 IL27RAQ6UWB1 636 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 SUSD1Q6UWL2 747 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 TMTC2Q8N394 836 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 OR2AJ1Q8NGZ0 328 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 FGFBP3Q8TAT2 258 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 RNF128Q8TEB7 428 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 PGAM5Q96HS1 289 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 SGK494Q96LW2 274 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 CEP295NLQ96MC4 621 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 PKP2Q99959 881 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 UBXN6Q9BZV1 441 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 ARRDC1-AS1Q9H2J1 176 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 AMACRQ9UHK6 382 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 TDRD15B5MCY1 1934 aaKnown RBP2.8□□□□□ -1.96
VPS50-216ENST00000484954 MYH15Q9Y2K3 1946 aa2.8□□□□□ -1.96
VPS50-216ENST00000484954 PI4KAP2A4QPH2 592 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 CDRT15L2A8MXV6 281 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 GAPDHSO14556 408 aaPredicted RBP2.79□□□□□ -1.96
VPS50-216ENST00000484954 PI15O43692 258 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 CREB3O43889 395 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 PTP4A3O75365 173 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 PIGNO95427 931 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 SCGB1D1O95968 90 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 ACADMP11310 421 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 EFNA1P20827 205 aaPredicted RBP2.79□□□□□ -1.96
VPS50-216ENST00000484954 DCAF7P61962 342 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 IRX6P78412 446 aaPredicted RBP2.79□□□□□ -1.96
VPS50-216ENST00000484954 CRYMQ14894 314 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 PHLDA2Q53GA4 152 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 CCDC30Q5VVM6 783 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 LINGO4Q6UY18 593 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 INTS8Q75QN2 995 aaKnown RBP2.79□□□□□ -1.96
VPS50-216ENST00000484954 TTC39CQ8N584 583 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 OR13J1Q8NGT2 312 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 FAM222BQ8WU58 562 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 MTERF3Q96E29 417 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 NSL1Q96IY1 281 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 OR6C1Q96RD1 312 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 RBM4BQ9BQ04 359 aaKnown RBP2.79□□□□□ -1.96
VPS50-216ENST00000484954 S1PR5Q9H228 398 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 ATP13A3Q9H7F0 1226 aa2.79□□□□□ -1.96
VPS50-216ENST00000484954 SDR39U1Q9NRG7 319 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms