RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 TEX264Q9Y6I9 313 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 NLRC5Q86WI3 1866 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 CUL9Q8IWT3 2517 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 SCN5AQ14524 2016 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 PTPRDP23468 1912 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 HEATR9A2RTY3 570 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SRRM3A6NNA2 597 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 RFPL2O75678 378 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 FAM155BO75949 473 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 KRT38O76015 456 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CNTN5O94779 1100 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 TMEM63AO94886 807 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 METTL18O95568 372 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 IGSF6O95976 241 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 GSRP00390 522 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ATP5BP06576 529 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SRPRAP08240 638 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 INHBAP08476 426 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 IRF1P10914 325 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ETS1P14921 441 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 MYOGP15173 224 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 PRKCHP24723 683 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ADRA1DP25100 572 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 PSMB4P28070 264 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 HOXD9P28356 352 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SLC6A4P31645 630 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 MSH2P43246 934 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SERPINH1P50454 418 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SUOXP51687 545 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 RPS24P62847 133 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 MRPS25P82663 173 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 GAD2Q05329 585 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ZBTB17Q13105 803 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SLC29A2Q14542 456 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 TERF2Q15554 542 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 UAP1Q16222 522 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 AARS2Q5JTZ9 985 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 PCID2Q5JVF3 399 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 PDPK2PQ6A1A2 396 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CXorf57Q6NSI4 855 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ANKRD54Q6NXT1 300 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CASC4Q6P4E1 433 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 KIAA0408Q6ZU52 694 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 C3orf62Q6ZUJ4 267 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 GRASPQ7Z6J2 395 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 GALNT7Q86SF2 657 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CAND1Q86VP6 1230 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SLC26A11Q86WA9 606 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 LRRC6Q86X45 466 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ARID3BQ8IVW6 561 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 BBS7Q8IWZ6 715 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 YAF2Q8IY57 180 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 RAVER1Q8IY67 606 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CARNMT1Q8N4J0 409 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CPA6Q8N4T0 437 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 PCDH20Q8N6Y1 951 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 GLIS1Q8NBF1 620 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 FBXO36Q8NEA4 188 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 TET1Q8NFU7 2136 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 BPIFB1Q8TDL5 484 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 HCAR2Q8TDS4 363 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ACMSDQ8TDX5 336 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ELSPBP1Q96BH3 223 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 TADA1Q96BN2 335 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 PABPC5Q96DU9 382 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 PTCD3Q96EY7 689 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CABS1Q96KC9 395 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 GDAP1L1Q96MZ0 367 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ASB2Q96Q27 587 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 NUDCD1Q96RS6 583 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CPNE1Q99829 537 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 HEPHQ9BQS7 1158 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 FEM1AQ9BSK4 669 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 FAM167BQ9BTA0 163 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 KIFC1Q9BW19 673 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 NEUROG2Q9H2A3 272 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ATP13A3Q9H7F0 1226 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 TMBIM4Q9HC24 238 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ZFP14Q9HCL3 533 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SPHK2Q9NRA0 654 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 GKN1Q9NS71 199 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 ABCB8Q9NUT2 735 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 DUS2Q9NX74 493 aaKnown RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 VPS18Q9P253 973 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 CORO1CQ9ULV4 474 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-206ENST00000484520 FAM50BQ9Y247 325 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 HS3ST2Q9Y278 367 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SLC27A6Q9Y2P4 619 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 TTLL3Q9Y4R7 772 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 SNX10Q9Y5X0 201 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 NFS1Q9Y697 457 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 MAD1L1Q9Y6D9 718 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 TRIP11Q15643 1979 aa4.29□□□□□ -1.72
SPTA1-206ENST00000484520 COL6A3P12111 3177 aa4.28□□□□□ -1.72
SPTA1-206ENST00000484520 LAMA2P24043 3122 aaKnown RBP4.28□□□□□ -1.72
SPTA1-206ENST00000484520 LOC285095A0A1B0GVY8 99 aa4.28□□□□□ -1.72
SPTA1-206ENST00000484520 TCRBV9S1A1TA0A576 114 aa4.28□□□□□ -1.72
SPTA1-206ENST00000484520 CCDC189A1A4V9 331 aa4.28□□□□□ -1.72
SPTA1-206ENST00000484520 F8W8V4 182 aa4.28□□□□□ -1.72
SPTA1-206ENST00000484520 GOLGA8MH3BSY2 632 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms