RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 XPR1Q9UBH6 696 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CD84Q9UIB8 345 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 APPL1Q9UKG1 709 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 WASF3Q9UPY6 502 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 APOBEC2Q9Y235 224 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CRYL1Q9Y2S2 319 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF711Q9Y462 761 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 SPO11Q9Y5K1 396 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 COMMD10Q9Y6G5 202 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CAPN7Q9Y6W3 813 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ACACBO00763 2458 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 C1orf232A0A0U1RR37 186 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SLCO1B7G3V0H7 640 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 H7C0S8 307 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 CCL22O00626 93 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 TRIM38O00635 465 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 HGSO14964 777 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 FLRT2O43155 660 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 HTRA2O43464 458 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 TSPAN6O43657 245 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 AP1G1O43747 822 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SMIM24O75264 130 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 VPS26AO75436 327 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 DNAJC8O75937 253 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 TM7SF2O76062 418 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SRP72O76094 671 aaKnown RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 CCDC166P0CW27 439 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 GIMD1P0DJR0 217 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 KITP10721 976 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 ITGALP20701 1170 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 FDXRP22570 491 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 ATP5F1P24539 256 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 PSMA3P25788 255 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SERPINB5P36952 375 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 ETV3P41162 512 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 GLRBP48167 497 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 AQP5P55064 265 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 CACNG1Q06432 222 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 BNIP1Q12981 228 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SGCGQ13326 291 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 CSHL1Q14406 222 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 WSCD2Q2TBF2 565 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 ZDHHC20Q5W0Z9 365 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 CRTC1Q6UUV9 634 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 IL27RAQ6UWB1 636 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 DHRS13Q6UX07 377 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 LIPIQ6XZB0 460 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 USP45Q70EL2 814 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 TAS2R42Q7RTR8 314 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 KANSL1Q7Z3B3 1105 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 HSD11B1LQ7Z5J1 315 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 RAB44Q7Z6P3 723 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 LDB1Q86U70 411 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 MTDHQ86UE4 582 aaKnown RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 TRIM74Q86UV6 250 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SLC22A9Q8IVM8 553 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 CEP97Q8IW35 865 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 CENPLQ8N0S6 344 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SLC25A45Q8N413 288 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 ACVR1CQ8NER5 493 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 RFWD2Q8NHY2 731 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 HEXDCQ8WVB3 486 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 NXNL1Q96CM4 212 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 PDXPQ96GD0 296 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 LRIG1Q96JA1 1093 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 CNDP2Q96KP4 475 aaKnown RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF641Q96N77 438 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 AARSD1Q9BTE6 412 aaKnown RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 LGR4Q9BXB1 951 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 MYLK2Q9H1R3 596 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SAR1AQ9NR31 198 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 GPR27Q9NS67 375 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 MARCH4Q9P2E8 410 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 DKK3Q9UBP4 350 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 HEY2Q9UBP5 337 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 MARCOQ9UEW3 520 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 PRDM4Q9UKN5 801 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 ZMIZ1Q9ULJ6 1067 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 SLC12A4Q9UP95 1085 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 DMTF1Q9Y222 760 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 DNAJC16Q9Y2G8 782 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 PCDHB1Q9Y5F3 818 aa6.82□□□□□ -1.32
BRCA1-216ENST00000484087 TPRP12270 2363 aaKnown RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 GOLGA4Q13439 2230 aaKnown RBP6.82□□□□□ -1.32
BRCA1-216ENST00000484087 ZFC3H1O60293 1989 aaKnown RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 A0A0J9YYE9 177 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 CCDC189A1A4V9 331 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 CAPN8A6NHC0 703 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 E5RI56 91 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 G3V2L1 256 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 AGRPO00253 132 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 FPGTO14772 594 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 AURKAO14965 403 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ST8SIA5O15466 376 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 SIGLEC6O43699 453 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 LZTS3O60299 673 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 NPHS1O60500 1241 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 DNAJC6O75061 913 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 PIAS2O75928 621 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 RECQL5O94762 991 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms