RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SLC1A5Q15758 541 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 HIF1AQ16665 826 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 BCL7AQ4VC05 210 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 ARMC6Q6NXE6 501 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 MRPL14Q6P1L8 145 aaKnown RBP12.47□□□□□ -0.41
UBR4-213ENST00000483922 FLVCR1-AS1Q8TAF5 88 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 SRPK1Q96SB4 655 aaKnown RBP12.47□□□□□ -0.41
UBR4-213ENST00000483922 ILKAPQ9H0C8 392 aaPredicted RBP12.47□□□□□ -0.41
UBR4-213ENST00000483922 OR52A5Q9H2C5 316 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 XKR8Q9H6D3 395 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 SYTL2Q9HCH5 934 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 CTTNBP2NLQ9P2B4 639 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 FAM153AQ9UHL3 310 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 G3BP2Q9UN86 482 aaKnown RBP12.47□□□□□ -0.41
UBR4-213ENST00000483922 PTRH2Q9Y3E5 179 aaKnown RBP12.47□□□□□ -0.41
UBR4-213ENST00000483922 ARL5AQ9Y689 179 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
UBR4-213ENST00000483922 A0A1W2PQJ5 194 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 AGAP14A8MT82 685 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 E7EQ34 232 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 APOL1O14791 398 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 HNRNPRO43390 633 aaKnown RBP12.46□□□□□ -0.41
UBR4-213ENST00000483922 ALOX12BO75342 701 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 AGTP01019 485 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 PECAM1P16284 738 aaPredicted RBP12.46□□□□□ -0.41
UBR4-213ENST00000483922 MSH3P20585 1137 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 ITGAXP20702 1163 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 DYNLT1P63172 113 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 OLIG2Q13516 323 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 GSE1Q14687 1217 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 MESDQ14696 234 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 IQCB1Q15051 598 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 PDK1Q15118 436 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 ZFYVE27Q5T4F4 411 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 LYPLAL1Q5VWZ2 237 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 CCDC70Q6NSX1 233 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 IGFL2Q6UWQ7 119 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 RAB43Q86YS6 212 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 ACVR1CQ8NER5 493 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 OR52E1Q8NGJ3 308 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 BLOC1S5Q8TDH9 187 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 CPLX3Q8WVH0 158 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 LCN9Q8WX39 176 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 RNF25Q96BH1 459 aaPredicted RBP12.46□□□□□ -0.41
UBR4-213ENST00000483922 FER1L6-AS2Q96M78 137 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 FERD3LQ96RJ6 166 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 DPH2Q9BQC3 489 aaPredicted RBP12.46□□□□□ -0.41
UBR4-213ENST00000483922 BPIFA3Q9BQP9 254 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 MESP1Q9BRJ9 268 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 DHRS4Q9BTZ2 278 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 SRMSQ9H3Y6 488 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 FANCEQ9HB96 536 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 DHCR7Q9UBM7 475 aaKnown RBP12.46□□□□□ -0.41
UBR4-213ENST00000483922 NOVA2Q9UNW9 492 aaKnown RBP12.46□□□□□ -0.41
UBR4-213ENST00000483922 COLEC10Q9Y6Z7 277 aa12.46□□□□□ -0.41
UBR4-213ENST00000483922 GSAPA4D1B5 854 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 PRAMEF1O95521 474 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 SLC35G4P0C7Q5 338 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 AGXTP21549 392 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 GCGRP47871 477 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 CDKN1CP49918 316 aaPredicted RBP12.45□□□□□ -0.42
UBR4-213ENST00000483922 PRKAA1Q13131 559 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 ITGA9Q13797 1035 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 ELOAQ14241 798 aaKnown RBP12.45□□□□□ -0.42
UBR4-213ENST00000483922 SLC9A5Q14940 896 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 TAZQ16635 292 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 LONRF2Q1L5Z9 754 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 DEFB110Q30KQ9 67 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 FILIP1LQ4L180 1135 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 ZDHHC20Q5W0Z9 365 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 RHBDD2Q6NTF9 364 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 GLT6D1Q7Z4J2 308 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 TRIM73Q86UV7 250 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 MCEMP1Q8IX19 187 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 ZNF567Q8N184 647 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 ZADH2Q8N4Q0 377 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 OR2Y1Q8NGV0 311 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 GRHL3Q8TE85 626 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 ZNF830Q96NB3 372 aaPredicted RBP12.45□□□□□ -0.42
UBR4-213ENST00000483922 FCRL5Q96RD9 977 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 ZCCHC2Q9C0B9 1178 aaKnown RBP12.45□□□□□ -0.42
UBR4-213ENST00000483922 TFB2MQ9H5Q4 396 aaKnown RBP12.45□□□□□ -0.42
UBR4-213ENST00000483922 FAM96AQ9H5X1 160 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.45□□□□□ -0.42
UBR4-213ENST00000483922 TMEM63CQ9P1W3 806 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 UVRAGQ9P2Y5 699 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 FKBPLQ9UIM3 349 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 CAPN11Q9UMQ6 739 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
UBR4-213ENST00000483922 DIDO1Q9BTC0 2240 aaKnown RBP12.45□□□□□ -0.42
UBR4-213ENST00000483922 CCDC66A2RUB6 948 aa12.44□□□□□ -0.42
UBR4-213ENST00000483922 PPP1R12AO14974 1030 aaPredicted RBP12.44□□□□□ -0.42
UBR4-213ENST00000483922 SRP72O76094 671 aaKnown RBP12.44□□□□□ -0.42
UBR4-213ENST00000483922 NDUFS1P28331 727 aa12.44□□□□□ -0.42
UBR4-213ENST00000483922 AKT1P31749 480 aa12.44□□□□□ -0.42
UBR4-213ENST00000483922 PRKG2Q13237 762 aa12.44□□□□□ -0.42
UBR4-213ENST00000483922 ASTE1Q2TB18 679 aaPredicted RBP12.44□□□□□ -0.42
UBR4-213ENST00000483922 MFSD7Q6UXD7 560 aa12.44□□□□□ -0.42
UBR4-213ENST00000483922 VSIG1Q86XK7 387 aa12.44□□□□□ -0.42
UBR4-213ENST00000483922 RFX6Q8HWS3 928 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms