RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 DIO3P55073 304 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 AP1S2P56377 157 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 DPTQ07507 201 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 TMEM115Q12893 351 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-225ENST00000483495 PDCD4Q53EL6 469 aaKnown RBP12.96□□□□□ -0.33
CPNE1-225ENST00000483495 BLOC1S3Q6QNY0 202 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 SCIMPQ6UWF3 145 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 LRRC70Q7Z2Q7 622 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 DSG4Q86SJ6 1040 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 KBTBD6Q86V97 674 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 YAF2Q8IY57 180 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 SFRP1Q8N474 314 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 SNX31Q8N9S9 440 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 NRG4Q8WWG1 115 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 SUSD6Q92537 303 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 HDAC8Q9BY41 377 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 SLC32A1Q9H598 525 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 MRPL40Q9NQ50 206 aaKnown RBP12.96□□□□□ -0.33
CPNE1-225ENST00000483495 HEBP1Q9NRV9 189 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 NDUFAF1Q9Y375 327 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 CCL27Q9Y4X3 112 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 LRRC42Q9Y546 428 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 ANGPTL3Q9Y5C1 460 aa12.96□□□□□ -0.33
CPNE1-225ENST00000483495 LAMA3Q16787 3333 aa12.96□□□□□ -0.34
CPNE1-225ENST00000483495 LSM1O15116 133 aaKnown RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 CFLARO15519 480 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ATG13O75143 517 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 KATNA1O75449 491 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 RECQL5O94762 991 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 HIST1H2AGP0C0S8 130 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 EPORP19235 508 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 HIST1H2ADP20671 130 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 CYP2A7P20853 494 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ME2P23368 584 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 VHLP40337 213 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 GRIA2P42262 883 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 CTSCP53634 463 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 EMX2Q04743 252 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ENPP2Q13822 863 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 GRM2Q14416 872 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ZXDCQ2QGD7 858 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 SMU1Q2TAY7 513 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ZNF658BQ4V348 819 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ATP6AP1LQ52LC2 224 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ATAT1Q5SQI0 421 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ZNF648Q5T619 568 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 IL27RAQ6UWB1 636 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 LRRC74BQ6ZQY2 392 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ERN2Q76MJ5 926 aaKnown RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 RETREG3Q86VR2 466 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 BEND7Q8N7W2 519 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 PCYOX1LQ8NBM8 494 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 GLMNQ92990 594 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 HIST1H2AHQ96KK5 128 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 HIST1H2AJQ99878 128 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 GDF15Q99988 308 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 CCM2Q9BSQ5 444 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 H2AFJQ9BTM1 129 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 PRSS16Q9NQE7 514 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ZIM2Q9NZV7 527 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 SLC5A10A0PJK1 596 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 OR2AG2A6NM03 316 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 C1QTNF3-AMACRE9PGA6 284 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 TRIM38O00635 465 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 TSPAN6O43657 245 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 PSIP1O75475 530 aaKnown RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 GSTM1P09488 218 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 C6P13671 934 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 XRCC1P18887 633 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 CAPN3P20807 821 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 HMOX2P30519 316 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ARL1P40616 181 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ZFP36L2P47974 494 aaKnown RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 GSTM4Q03013 218 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 RCAN2Q14206 197 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 RPS6KA2Q15349 733 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 BCL7AQ4VC05 210 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 TRIM46Q7Z4K8 759 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 MCOLN3Q8TDD5 553 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 RAB7BQ96AH8 199 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 NUS1Q96E22 293 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 P2RY13Q9BPV8 354 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 GPATCH1Q9BRR8 931 aaKnown RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 TACO1Q9BSH4 297 aaKnown RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 SLC29A3Q9BZD2 475 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 S1PR5Q9H228 398 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 SPAG4Q9NPE6 437 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 DYRK4Q9NR20 520 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 TMEM181Q9P2C4 612 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 MAP10Q9P2G4 905 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 CROTQ9UKG9 612 aa12.95□□□□□ -0.34
CPNE1-225ENST00000483495 TCF20Q9UGU0 1960 aaKnown RBP12.95□□□□□ -0.34
CPNE1-225ENST00000483495 TMEM202A6NGA9 273 aa12.94□□□□□ -0.34
CPNE1-225ENST00000483495 LOC730098B7Z3J9 87 aa12.94□□□□□ -0.34
CPNE1-225ENST00000483495 E7ENX8 843 aa12.94□□□□□ -0.34
CPNE1-225ENST00000483495 ARNTLO00327 626 aa12.94□□□□□ -0.34
CPNE1-225ENST00000483495 NR5A2O00482 541 aa12.94□□□□□ -0.34
CPNE1-225ENST00000483495 ACOT8O14734 319 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms