RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 TYRP1P17643 537 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 CHRM3P20309 590 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 ACADLP28330 430 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 RBMS1P29558 406 aaKnown RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 LEPRP48357 1165 aaKnown RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 PLTPP55058 493 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 CYP4F3Q08477 520 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 GLE1Q53GS7 698 aaKnown RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 HP1BP3Q5SSJ5 553 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 GALNT7Q86SF2 657 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 TBC1D21Q8IYX1 336 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 ZBED8Q8IZ13 594 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 C2CD4AQ8NCU7 369 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 FBXO36Q8NEA4 188 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 ZDHHC12Q96GR4 267 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 LRRC1Q9BTT6 524 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 TRIT1Q9H3H1 467 aaKnown RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 PPANQ9NQ55 473 aaKnown RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 FBXO6Q9NRD1 293 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 LATS2Q9NRM7 1088 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 OGFRQ9NZT2 677 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 KLHL42Q9P2K6 505 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 POLG2Q9UHN1 485 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 ASF1AQ9Y294 204 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 LOXL2Q9Y4K0 774 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 E5RI56 91 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 TOX3O15405 576 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-214ENST00000482733 BRINP1O60477 761 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 C9P02748 559 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 CAPNS1P04632 268 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 RPN2P04844 631 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 JMJD7P0C870 316 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 CSTF2P33240 577 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGN1-214ENST00000482733 ZNF789Q5FWF6 425 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 NAPRTQ6XQN6 538 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 OOSP2Q86WS3 158 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 ANKMY2Q8IV38 441 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 UNC5BQ8IZJ1 945 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 AGBL5Q8NDL9 886 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 MDM1Q8TC05 714 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 PYROXD1Q8WU10 500 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 ZCCHC14Q8WYQ9 949 aaKnown RBP16.16■□□□□ 0.18
HMGN1-214ENST00000482733 SEC14L1Q92503 715 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 RSC1A1Q92681 617 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 KCNJ9Q92806 393 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 ZNF578Q96N58 590 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-214ENST00000482733 WDR83Q9BRX9 315 aaKnown RBP16.16■□□□□ 0.18
HMGN1-214ENST00000482733 TFB2MQ9H5Q4 396 aaKnown RBP16.16■□□□□ 0.18
HMGN1-214ENST00000482733 TMEM9Q9P0T7 183 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 CDYLQ9Y232 598 aa16.16■□□□□ 0.18
HMGN1-214ENST00000482733 AKAP13Q12802 2813 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 OR5K3A6NET4 321 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 MATN2O00339 956 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 CAPN5O15484 640 aaPredicted RBP16.15■□□□□ 0.18
HMGN1-214ENST00000482733 NIPSNAP2O75323 286 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 ANKRD34CP0C6C1 535 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 MPSTP25325 297 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 ATP5DP30049 168 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 CARSP49589 748 aaKnown RBP16.15■□□□□ 0.18
HMGN1-214ENST00000482733 CSE1LP55060 971 aaKnown RBP16.15■□□□□ 0.18
HMGN1-214ENST00000482733 ERVPABLB-1P60509 514 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 MPP1Q00013 466 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 SLC7A5Q01650 507 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 C16orf72Q14CZ0 275 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 TTLL9Q3SXZ7 439 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 TEDDM1Q5T9Z0 273 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 ARMC6Q6NXE6 501 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 UNC5DQ6UXZ4 953 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 ARHGAP22Q7Z5H3 698 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 PALM2Q8IXS6 379 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 PHC3Q8NDX5 983 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 OR5K2Q8NHB8 316 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 FBXO25Q8TCJ0 367 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 LCN9Q8WX39 176 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 C9orf72Q96LT7 481 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 SLC46A1Q96NT5 459 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 FAM129AQ9BZQ8 928 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 SRMSQ9H3Y6 488 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 PLAC1Q9HBJ0 212 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 SAYSD1Q9NPB0 183 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 THSD1Q9NS62 852 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 HRASLS2Q9NWW9 162 aa16.15■□□□□ 0.18
HMGN1-214ENST00000482733 ASPMQ8IZT6 3477 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 COL27A1Q8IZC6 1860 aaPredicted RBP16.14■□□□□ 0.17
HMGN1-214ENST00000482733 A0A1W2PNU3 283 aaPredicted RBP16.14■□□□□ 0.17
HMGN1-214ENST00000482733 HAUS5O94927 633 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 TNFSF15O95150 251 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 ITGA2BP08514 1039 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 GUCY2DQ02846 1103 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 MGAT5Q09328 741 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 ILF2Q12905 390 aaKnown RBP16.14■□□□□ 0.17
HMGN1-214ENST00000482733 PRKAA1Q13131 559 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 FASTKD3Q14CZ7 662 aaKnown RBP16.14■□□□□ 0.17
HMGN1-214ENST00000482733 TBC1D25Q3MII6 688 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 SNAP47Q5SQN1 464 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 IRGCQ6NXR0 463 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 FOXR1Q6PIV2 292 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 ZDHHC24Q6UX98 284 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 PRSS42Q7Z5A4 293 aa16.14■□□□□ 0.17
HMGN1-214ENST00000482733 VRK3Q8IV63 474 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms