RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 APOBEC3BQ9UH17 382 aaKnown RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 TBK1Q9UHD2 729 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 ZNF180Q9UJW8 692 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 SLC39A10Q9ULF5 831 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 DNAJC16Q9Y2G8 782 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 DNMT3AQ9Y6K1 912 aaPredicted RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 LRP4O75096 1905 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 BPTFQ12830 3046 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 H3BM21 787 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 ARHGAP33O14559 1287 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 RASGRF2O14827 1237 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 VPS26AO75436 327 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TCEA3O75764 348 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 SMNDC1O75940 238 aaKnown RBP eCLIP11.37□□□□□ -0.59
HPS4-212ENST00000481910 SYPP08247 313 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TSPAN7P41732 249 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 ARRB1P49407 418 aaPredicted RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 SERPINB9P50453 376 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 SLC12A2P55011 1212 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 HNRNPKP61978 463 aaKnown RBP eCLIP11.37□□□□□ -0.59
HPS4-212ENST00000481910 CBX3Q13185 183 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 BMPR2Q13873 1038 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 LRP8Q14114 963 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TAF11Q15544 211 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 HLA-BQ31612 363 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 PRRT3Q5FWE3 981 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 CEP85LQ5SZL2 805 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TCEAL6Q6IPX3 200 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 FAM45BPQ6NSW5 357 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 IL27RAQ6UWB1 636 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TAOK1Q7L7X3 1001 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 OTOAQ7RTW8 1153 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 ACVR1CQ8NER5 493 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 OR2L2Q8NH16 312 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 FAM45AQ8TCE6 357 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 ELMO1Q92556 727 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TCEAL3Q969E4 200 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 LINC00615Q96LM1 132 aaPredicted RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 ELF4Q99607 663 aaPredicted RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 GPR22Q99680 433 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 ROPN1BQ9BZX4 212 aaPredicted RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 ROPN1Q9HAT0 212 aaPredicted RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 KLC4Q9NSK0 619 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 TRNAU1APQ9NX07 287 aaKnown RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 TAS2R13Q9NYV9 303 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 PSMC3IPQ9P2W1 217 aaPredicted RBP11.37□□□□□ -0.59
HPS4-212ENST00000481910 NCDNQ9UBB6 729 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 SLC23A2Q9UGH3 650 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 PLEKHM1Q9Y4G2 1056 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 NFS1Q9Y697 457 aa11.37□□□□□ -0.59
HPS4-212ENST00000481910 C17orf113A0A1B0GUU1 675 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 MGAT4DA6NG13 374 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 EBAG9O00559 213 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 LSM1O15116 133 aaKnown RBP11.36□□□□□ -0.59
HPS4-212ENST00000481910 KPNA5O15131 536 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 KRT37O76014 449 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 VCLP18206 1134 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 CCR7P32248 378 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 SKIV2L2P42285 1042 aaKnown RBP11.36□□□□□ -0.59
HPS4-212ENST00000481910 CDKN2DP55273 166 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 ARHGAP8P85298 464 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 CTBSQ01459 385 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 POU4F1Q01851 419 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 SPEM2Q0P670 501 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 ILF3Q12906 894 aaKnown RBP eCLIP11.36□□□□□ -0.59
HPS4-212ENST00000481910 C1orf61Q13536 156 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 BOP1Q14137 746 aaKnown RBP11.36□□□□□ -0.59
HPS4-212ENST00000481910 USP10Q14694 798 aaKnown RBP11.36□□□□□ -0.59
HPS4-212ENST00000481910 UGT3A1Q6NUS8 523 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 NAPRTQ6XQN6 538 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 HDXQ7Z353 690 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 CFAP206Q8IYR0 622 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 OXR1Q8N573 874 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 CCL4L1Q8NHW4 92 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 LKAAEAR1Q8TD35 194 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 ZIM3Q96PE6 472 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 GPR21Q99679 349 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 TIMM29Q9BSF4 260 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 GTPBP2Q9BX10 602 aaKnown RBP11.36□□□□□ -0.59
HPS4-212ENST00000481910 ZDHHC5Q9C0B5 715 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 GAREM1Q9H706 876 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 CAB39LQ9H9S4 337 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 GALPQ9UBC7 116 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 CTNNAL1Q9UBT7 734 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 KCNK6Q9Y257 313 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 MED16Q9Y2X0 877 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 GPR179Q6PRD1 2367 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 MUC6Q6W4X9 2439 aa11.36□□□□□ -0.59
HPS4-212ENST00000481910 IQANK1A0A1B0GTG1 560 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 HMX2A2RU54 273 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 DFNA5O60443 496 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 KCNJ13O60928 360 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 SDC3O75056 442 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 CDH16O75309 829 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 SNRPAP09012 282 aaKnown RBP11.35□□□□□ -0.59
HPS4-212ENST00000481910 GSTM1P09488 218 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 ZNF806P0C7X5 589 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 VAMP1P23763 118 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 CNTFP26441 200 aa11.35□□□□□ -0.59
HPS4-212ENST00000481910 AK4P27144 223 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms