RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 OR8K5Q8NH50 307 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 ALS2CR12Q96Q35 445 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 NRTNQ99748 197 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 HGH1Q9BTY7 390 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 GPR87Q9BY21 358 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 KLHL25Q9H0H3 589 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 LRRC40Q9H9A6 602 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 NLE1Q9NVX2 485 aaPredicted RBP14.82□□□□□ -0.04
LIMS3-203ENST00000480744 BTRCQ9Y297 605 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 TMEM150CB9EJG8 249 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 MATN2O00339 956 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 BTN3A3O00478 584 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 FTCDO95954 541 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 RECKO95980 971 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 KLK3P07288 261 aaPredicted RBP14.81□□□□□ -0.04
LIMS3-203ENST00000480744 PDHA2P29803 388 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 CHAF1BQ13112 559 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 PRKG2Q13237 762 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 UGT8Q16880 541 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 KCTD11Q693B1 232 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 SYVN1Q86TM6 617 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 SLC38A9Q8NBW4 561 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 OR52E1Q8NGJ3 308 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 SEC14L1Q92503 715 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 CPT1BQ92523 772 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 CLIP3Q96DZ5 547 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 C19orf43Q9BQ61 176 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 TRIM55Q9BYV6 548 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 CHST8Q9H2A9 424 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 OR52A5Q9H2C5 316 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 XKR8Q9H6D3 395 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 C1GALT1Q9NS00 363 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 SMARCAL1Q9NZC9 954 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 FARSAQ9Y285 508 aaKnown RBP14.81□□□□□ -0.04
LIMS3-203ENST00000480744 R3HDM2Q9Y2K5 976 aaKnown RBP14.81□□□□□ -0.04
LIMS3-203ENST00000480744 CCDC88CQ9P219 2028 aa14.81□□□□□ -0.04
LIMS3-203ENST00000480744 SNRNP200O75643 2136 aaKnown RBP14.81□□□□□ -0.04
LIMS3-203ENST00000480744 FLNCQ14315 2725 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 IGLV3-16A0A075B6K0 115 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 TRBV5-4A0A0C4DH59 114 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 ARGFXA6NJG6 315 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 CYSRT1A8MQ03 144 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 BTN3A1O00481 513 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 MAP3K7O43318 606 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 PVRP15151 417 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 ST6GAL1P15907 406 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 CYP2A7P20853 494 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 PRDX3P30048 256 aaKnown RBP14.8□□□□□ -0.04
LIMS3-203ENST00000480744 CDC25BP30305 580 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 LMAN1P49257 510 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 GDF10P55107 478 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 GSDMDP57764 484 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 CACNG1Q06432 222 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 ABRQ12979 859 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 SEMA5AQ13591 1074 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 IL10RAQ13651 578 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 DBN1Q16643 649 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 P3H1Q32P28 736 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 CPZQ66K79 652 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 KLHDC8BQ8IXV7 354 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 SYCE1Q8N0S2 351 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 THAP4Q8WY91 577 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 CDKN2AIPNLQ96HQ2 116 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 BAG1Q99933 345 aaPredicted RBP14.8□□□□□ -0.04
LIMS3-203ENST00000480744 TMEM121Q9BTD3 319 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 SLC7A5P2Q9GIP4 190 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 MVB12BQ9H7P6 319 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 LATS2Q9NRM7 1088 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 PLAAQ9Y263 795 aa14.8□□□□□ -0.04
LIMS3-203ENST00000480744 TCRBV7S2A1N4TA0A589 114 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 C2orf74A8MZ97 194 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 MIF4GDA9UHW6 222 aaKnown RBP14.79□□□□□ -0.04
LIMS3-203ENST00000480744 H7C0S8 307 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 MEN1O00255 615 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 SEC16AO15027 2179 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 PSMD3O43242 534 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 CD151P48509 253 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 KIF5AQ12840 1032 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 BRD3Q15059 726 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 LCN10Q6JVE6 187 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 HOOK3Q86VS8 718 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 AMIGO1Q86WK6 493 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 APLFQ8IW19 511 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-203ENST00000480744 PIANPQ8IYJ0 282 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 ENDOVQ8N8Q3 282 aaKnown RBP14.79□□□□□ -0.04
LIMS3-203ENST00000480744 SPC24Q8NBT2 197 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 OR1L3Q8NH93 324 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 STYXQ8WUJ0 223 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 TFGQ92734 400 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-203ENST00000480744 COL26A1Q96A83 441 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 DESI2Q9BSY9 194 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 TFB2MQ9H5Q4 396 aaKnown RBP14.79□□□□□ -0.04
LIMS3-203ENST00000480744 ACTR5Q9H9F9 607 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-203ENST00000480744 ACSS2Q9NR19 701 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 SNX7Q9UNH6 387 aa14.79□□□□□ -0.04
LIMS3-203ENST00000480744 FER1L5A0AVI2 2057 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 A0A0U1RQJ8 604 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 OR51F1A6NGY5 319 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 AP2A2O94973 939 aa14.78□□□□□ -0.04
LIMS3-203ENST00000480744 AP2A1O95782 977 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms