RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 INHBCP55103 352 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 GFERP55789 205 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CAV1Q03135 178 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PRKG2Q13237 762 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 STEAP4Q687X5 459 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CAPRIN2Q6IMN6 1127 aaKnown RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CNSTQ6PJW8 725 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ZDHHC24Q6UX98 284 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 VRK3Q8IV63 474 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PALM2Q8IXS6 379 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 RBM12BQ8IXT5 1001 aaKnown RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 LRRN4CLQ8ND94 238 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 PHC3Q8NDX5 983 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 OR5AR1Q8NGP9 310 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 MDM1Q8TC05 714 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ASZ1Q8WWH4 475 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 TFGQ92734 400 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 C9orf72Q96LT7 481 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CCDC74BQ96LY2 380 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 NDNQ99608 321 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 RHOXF2Q9BQY4 288 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 STRADBQ9C0K7 418 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ZFATQ9P243 1243 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 CIDEBQ9UHD4 219 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 DMGDHQ9UI17 866 aaKnown RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 SATB2Q9UPW6 733 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 RUVBL2Q9Y230 463 aaKnown RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 ASF1AQ9Y294 204 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 TDRKHQ9Y2W6 561 aaKnown RBP6.73□□□□□ -1.33
BRCA1-215ENST00000478531 HEBP2Q9Y5Z4 205 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 AK5Q9Y6K8 562 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 COLEC10Q9Y6Z7 277 aa6.73□□□□□ -1.33
BRCA1-215ENST00000478531 LOC400499M0QZD8 3231 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 MGAQ8IWI9 3026 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 IGHV5-10-1A0A0J9YXX1 117 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 SLC5A10A0PJK1 596 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 TRABD2BA6NFA1 517 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 A8MU76 341 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 BHMG1C9JSJ3 638 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-215ENST00000478531 H3BMM5 538 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 PIAS1O75925 651 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 HAUS5O94927 633 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 HGFP14210 728 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 PKMP14618 531 aaKnown RBP6.72□□□□□ -1.33
BRCA1-215ENST00000478531 AOAHP28039 575 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 PPP1CAP62136 330 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 GABREP78334 506 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 CFHR1Q03591 330 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 ABRQ12979 859 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 CAMK2BQ13554 666 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 CUL1Q13616 776 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 IRGCQ6NXR0 463 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF549Q6P9A3 640 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 UNQ6494/PRO21346Q6UXR6 183 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 ZNF574Q6ZN55 896 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-215ENST00000478531 SPNS2Q8IVW8 549 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 SLITRK4Q8IW52 837 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 LMNTD2Q8IXW0 634 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 SLC22A15Q8IZD6 547 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 SIDT2Q8NBJ9 832 aaKnown RBP6.72□□□□□ -1.33
BRCA1-215ENST00000478531 C2CD4AQ8NCU7 369 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-215ENST00000478531 GATA6Q92908 595 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 NXPE2Q96DL1 559 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 TMEM74Q96NL1 305 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 TGM7Q96PF1 710 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 NRTNQ99748 197 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 KIR3DX1Q9H7L2 352 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 UCK1Q9HA47 277 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 FAM114A2Q9NRY5 505 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 OGFRQ9NZT2 677 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 GALPQ9UBC7 116 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 SLC24A2Q9UI40 661 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 PLAGL1Q9UM63 463 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 CDYLQ9Y232 598 aa6.72□□□□□ -1.33
BRCA1-215ENST00000478531 CCDC187A0A096LP49 1063 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 OR6C74A6NCV1 312 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 KPNA5O15131 536 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 EIF3HO15372 352 aaKnown RBP eCLIP6.71□□□□□ -1.33
BRCA1-215ENST00000478531 RASSF9O75901 435 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 THRAP10827 490 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 NDUFS1P28331 727 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 SSTR1P30872 391 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 MAGEA4P43358 317 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 BDKRB1P46663 353 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 LEPRP48357 1165 aaKnown RBP6.71□□□□□ -1.33
BRCA1-215ENST00000478531 CD151P48509 253 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 LIMK2P53671 638 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 ADARP55265 1226 aaKnown RBP6.71□□□□□ -1.33
BRCA1-215ENST00000478531 PLOD1Q02809 727 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-215ENST00000478531 CYP4F3Q08477 520 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 GLE1Q53GS7 698 aaKnown RBP6.71□□□□□ -1.33
BRCA1-215ENST00000478531 RBM20Q5T481 1227 aaKnown RBP6.71□□□□□ -1.33
BRCA1-215ENST00000478531 TEDDM1Q5T9Z0 273 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 WDR74Q6RFH5 385 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-215ENST00000478531 FAM92BQ6ZTR7 304 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 CNTN4Q8IWV2 1026 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 ZBTB2Q8N680 514 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 GPATCH11Q8N954 259 aa6.71□□□□□ -1.33
BRCA1-215ENST00000478531 ACVR1CQ8NER5 493 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms