RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 PHACTR4Q8IZ21 702 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 CKAP2Q8WWK9 683 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 NELL1Q92832 810 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 MAGEB18Q96M61 343 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 WWP1Q9H0M0 922 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 TMEM168Q9H0V1 697 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 OR52A5Q9H2C5 316 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 DPEP2Q9H4A9 486 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 DNAJC28Q9NX36 388 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 CD274Q9NZQ7 290 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 ACSL5Q9ULC5 683 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 OARD1Q9Y530 152 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 DGKBQ9Y6T7 804 aa13.03□□□□□ -0.32
LMNA-214ENST00000478063 A0A1B0GTW7 788 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 A8MT66 165 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 PDZK1P1A8MUH7 402 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 VILLO15195 856 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 SLC16A5O15375 505 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 SNX2O60749 519 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 MATN4O95460 622 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 CATP04040 527 aaKnown RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 CTSEP14091 401 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 GNSP15586 552 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 BGNP21810 368 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 AK4P27144 223 aaPredicted RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 RPL10P27635 214 aaKnown RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 MAP4P27816 1152 aaKnown RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 CSNK1EP49674 416 aaKnown RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 CLCNKAP51800 687 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 NXPH1P58417 271 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 CTBSQ01459 385 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 ILF3Q12906 894 aaKnown RBP eCLIP13.02□□□□□ -0.33
LMNA-214ENST00000478063 TEAD4Q15561 434 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 TGFBIQ15582 683 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 PHKG1Q16816 387 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 PPP1R3AQ16821 1122 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 LIPMQ5VYY2 423 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 SPATS2Q86XZ4 545 aaKnown RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 SLC22A9Q8IVM8 553 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 FBXO39Q8N4B4 442 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 LRRC8CQ8TDW0 803 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 ASB11Q8WXH4 323 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 SKA1Q96BD8 255 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 CCDC126Q96EE4 140 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 PHF21BQ96EK2 531 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 RMDN2Q96LZ7 410 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 EGFL8Q99944 293 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 TRIM54Q9BYV2 358 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 TCEAL2Q9H3H9 227 aaPredicted RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 C11orf16Q9NQ32 467 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 OXSMQ9NWU1 459 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 TRNAU1APQ9NX07 287 aaKnown RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 SIRPGQ9P1W8 387 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 APOBEC3BQ9UH17 382 aaKnown RBP13.02□□□□□ -0.33
LMNA-214ENST00000478063 TMCO1Q9UM00 188 aa13.02□□□□□ -0.33
LMNA-214ENST00000478063 PRR5-ARHGAP8B1AHC4 643 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 GFYI3L273 518 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 IFRD1O00458 451 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 FFAR2O15552 330 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 TRIM13O60858 407 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 PSIP1O75475 530 aaKnown RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 IPO13O94829 963 aaKnown RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 GUCA1CO95843 209 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 ENO2P09104 434 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 HIST1H2AGP0C0S8 130 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 FGF3P11487 239 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 MTHFD2P13995 350 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 JUNDP17535 347 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 HIST1H2ADP20671 130 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 ACTR1BP42025 376 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 BDKRB1P46663 353 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 BLKP51451 505 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 ACTR1AP61163 376 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 CBX1P83916 185 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 ASPHQ12797 758 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 SIM2Q14190 667 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 PFKFB4Q16877 469 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 SLC30A9Q6PML9 568 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 UNC5DQ6UXZ4 953 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 PRR23BQ6ZRT6 265 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 ZCCHC23Q6ZST2 131 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 RAB44Q7Z6P3 723 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 PTGR2Q8N8N7 351 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 CCL4L1Q8NHW4 92 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 MCOLN3Q8TDD5 553 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 PIGKQ92643 395 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 ZNF75CPQ92670 426 aaPredicted RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 DLG3Q92796 817 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 ZC3H10Q96K80 434 aaKnown RBP13.01□□□□□ -0.33
LMNA-214ENST00000478063 HIST1H2AHQ96KK5 128 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 HIST1H2AJQ99878 128 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 H2AFJQ9BTM1 129 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 SLC12A9Q9BXP2 914 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 CAAP1Q9H8G2 361 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 MANSC1Q9H8J5 431 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 PARVBQ9HBI1 364 aa13.01□□□□□ -0.33
LMNA-214ENST00000478063 NCKIPSDQ9NZQ3 722 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms