RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ATP1A1-AS1Q5TC04 95 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 CCDC181Q5TID7 509 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 TAF3Q5VWG9 929 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 PRAMEF9Q5VWM5 478 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 NKAIN2Q5VXU1 208 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 MBNL2Q5VZF2 373 aaKnown RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 SPECC1LQ69YQ0 1117 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 LRRC31Q6UY01 552 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 Q6ZRM9 215 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 TIPARPQ7Z3E1 657 aaKnown RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 ZSCAN30Q86W11 494 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 PRIMA1Q86XR5 153 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 FSTL5Q8N475 847 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 RYBPQ8N488 228 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 BMPERQ8N8U9 685 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 FAM46DQ8NEK8 389 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 GPT2Q8TD30 523 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 CXorf40AQ8TE69 158 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 THAP3Q8WTV1 239 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 SLC20A1Q8WUM9 679 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 CENPIQ92674 756 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 C18orf8Q96DM3 657 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 RNF31Q96EP0 1072 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 HMCESQ96FZ2 354 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 TIGD1Q96MW7 591 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 MNTQ99583 582 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 DNAJC7Q99615 494 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 NAA15Q9BXJ9 866 aaKnown RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 STRADBQ9C0K7 418 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 PDFQ9HBH1 243 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 ZNF71Q9NQZ8 489 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 OCIAD1Q9NX40 245 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 LRIT1Q9P2V4 623 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 OR12D3Q9UGF7 316 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 DNAJC12Q9UKB3 198 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 PACSIN3Q9UKS6 424 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 PLAAQ9Y263 795 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 PLEKHM1Q9Y4G2 1056 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 PCYT1BQ9Y5K3 369 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-207ENST00000477676 MED13LQ71F56 2210 aa4.57□□□□□ -1.68
CKS1B-207ENST00000477676 CCDC168Q8NDH2 2452 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 A0A0U1RQS6 177 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 LOC101059948A0A1B0GTJ6 334 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 CXorf51AA0A1B0GTR3 108 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 GTPBP10A4D1E9 387 aaKnown RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 C2CD4BA6NLJ0 364 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 B4DGG1 531 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 TMX2-CTNND1H3BSU7 103 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 J3KR12 359 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 TOR1BO14657 336 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 PPM1DO15297 605 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 BUB1O43683 1085 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 RECQL5O94762 991 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 TOX4O94842 621 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 EML2O95834 649 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 GNA14O95837 355 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 F9P00740 461 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 PRLP01236 227 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 TNFP01375 233 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 FGF1P05230 155 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 PLEKP08567 350 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 CTSEP14091 401 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 GYPEP15421 78 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 CYP11B1P15538 503 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 F8A1P23610 371 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 AK4P27144 223 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 OAS2P29728 719 aaKnown RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 KRT9P35527 623 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 TRIM23P36406 574 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 CASRP41180 1078 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 BLKP51451 505 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 KIAA1024LP59773 190 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 FMO1Q01740 532 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 MTA1Q13330 715 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 MTM1Q13496 603 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 NR1D2Q14995 579 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 POLD3Q15054 466 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 UGP2Q16851 508 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 AMZ1Q400G9 498 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 NAA35Q5VZE5 725 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 RWDD4Q6NW29 188 aaKnown RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 GBP6Q6ZN66 633 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 RFLNAQ6ZTI6 216 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ARCQ7LC44 396 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 TAF8Q7Z7C8 310 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 GKN2Q86XP6 184 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 CAMK1DQ8IU85 385 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ZDHHC17Q8IUH5 632 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ELOA2Q8IYF1 753 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ZZZ3Q8IYH5 903 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 UNC5BQ8IZJ1 945 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 CMTM4Q8IZR5 234 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 NAGSQ8N159 534 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 CBARPQ8N350 705 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-207ENST00000477676 PROKR1Q8TCW9 393 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 RXFP2Q8WXD0 754 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ST8SIA2Q92186 375 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ART4Q93070 314 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 MIB2Q96AX9 1013 aa4.56□□□□□ -1.68
CKS1B-207ENST00000477676 ECHDC3Q96DC8 303 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms