RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ELMO1Q92556 727 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 DLG3Q92796 817 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 FBXL8Q96CD0 374 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 NUS1Q96E22 293 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 MSANTD3Q96H12 275 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 METTL2AQ96IZ6 378 aaKnown RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 FAM129BQ96TA1 746 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 HOPXQ9BPY8 73 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 TACO1Q9BSH4 297 aaKnown RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 APOL5Q9BWW9 433 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 C1QTNF7Q9BXJ2 289 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 BRINP2Q9C0B6 783 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 RSPH9Q9H1X1 276 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 S1PR5Q9H228 398 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 DPEP2Q9H4A9 486 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 NOL11Q9H8H0 719 aaKnown RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 IPPKQ9H8X2 491 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 TRIM39Q9HCM9 518 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 PRSS16Q9NQE7 514 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 GID8Q9NWU2 228 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ARL15Q9NXU5 204 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ASIC5Q9NY37 505 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ZIM2Q9NZV7 527 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 STX18Q9P2W9 335 aaKnown RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 SLC7A8Q9UHI5 535 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 CDH22Q9UJ99 828 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 IKZF3Q9UKT9 509 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 TMPRSS11EQ9UL52 423 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 SNX6Q9UNH7 406 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 FIS1Q9Y3D6 152 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ST14Q9Y5Y6 855 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 SCN8AQ9UQD0 1980 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 C15orf38-AP3S2A0A0A6YYH1 394 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 A0A0U1RQS6 177 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 SLC5A10A0PJK1 596 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 AIM2O14862 343 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 GPR39O43194 453 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 NRP2O60462 931 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 SYNCRIPO60506 623 aaKnown RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 PSIP1O75475 530 aaKnown RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 RECQL5O94762 991 aaPredicted RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 CLDN9O95484 217 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 STAMBPO95630 424 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 C6P13671 934 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 ITGB6P18564 788 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 POU3F3P20264 500 aaPredicted RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 GPX3P22352 226 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 GDI1P31150 447 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 IL12RB1P42701 662 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 GPR1P46091 355 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 AGTR2P50052 363 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 ERVPABLB-1P60509 514 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 SLC25A3Q00325 362 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 HSPA14Q0VDF9 509 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 STARD3Q14849 445 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 KPNB1Q14974 876 aaKnown RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 COL19A1Q14993 1142 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 CCDC6Q16204 474 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 KIF19Q2TAC6 998 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 AGKQ53H12 422 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 TMEM198Q66K66 360 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 ADAMTSL4Q6UY14 1074 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 TRIM46Q7Z4K8 759 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 ARPINQ7Z6K5 226 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.77□□□□□ -1.17
VMA21-203ENST00000477649 TDHQ8IZJ6 230 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 POU5F2Q8N7G0 328 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 GLB1L3Q8NCI6 653 aaPredicted RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 DNAJB8Q8NHS0 232 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 CSGALNACT1Q8TDX6 532 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 SCAMP4Q969E2 229 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 ARRDC3Q96B67 414 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 MOCOSQ96EN8 888 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 ZFYVE19Q96K21 471 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 CCDC138Q96M89 665 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 NSUN5Q96P11 429 aaKnown RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 MYADMQ96S97 322 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 VCX3BQ9H321 246 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 C8orf33Q9H7E9 229 aaPredicted RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 WDR41Q9HAD4 459 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 TNFRSF12AQ9NP84 129 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 HEBP1Q9NRV9 189 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 AIG1Q9NVV5 245 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 GPRC5BQ9NZH0 403 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 TSR3Q9UJK0 312 aaKnown RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 MAPRE3Q9UPY8 281 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 PDE10AQ9Y233 779 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 AP3M1Q9Y2T2 418 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 TMED5Q9Y3A6 229 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 FADS3Q9Y5Q0 445 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 STON1Q9Y6Q2 735 aa7.77□□□□□ -1.17
VMA21-203ENST00000477649 KIF26AQ9ULI4 1882 aaPredicted RBP7.77□□□□□ -1.17
VMA21-203ENST00000477649 A0A1W2PP18 115 aa7.76□□□□□ -1.17
VMA21-203ENST00000477649 FAM234BA2RU67 622 aa7.76□□□□□ -1.17
VMA21-203ENST00000477649 OTOL1A6NHN0 477 aaPredicted RBP7.76□□□□□ -1.17
VMA21-203ENST00000477649 EPOPA6NHQ4 379 aa7.76□□□□□ -1.17
VMA21-203ENST00000477649 FADS2P1A8MWK0 482 aa7.76□□□□□ -1.17
VMA21-203ENST00000477649 ANHXE9PGG2 379 aa7.76□□□□□ -1.17
VMA21-203ENST00000477649 ARNTLO00327 626 aa7.76□□□□□ -1.17
VMA21-203ENST00000477649 OR7A17O14581 309 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms