RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 GBP5Q96PP8 586 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 C17orf62Q9BQA9 187 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 DPH2Q9BQC3 489 aaPredicted RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 ANP32EQ9BTT0 268 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 HGH1Q9BTY7 390 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 UNKQ9C0B0 810 aaKnown RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 XPO4Q9C0E2 1151 aaKnown RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 TRABDQ9H4I3 376 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 XKR8Q9H6D3 395 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 ASB8Q9H765 288 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 SYTL2Q9HCH5 934 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 C1GALT1Q9NS00 363 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 P4HTMQ9NXG6 502 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 FAM153AQ9UHL3 310 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 CRLS1Q9UJA2 301 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 POMT2Q9UKY4 750 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 ACSL5Q9ULC5 683 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 CDYLQ9Y232 598 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 NTNG1Q9Y2I2 539 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 HEBP2Q9Y5Z4 205 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 DNMT3AQ9Y6K1 912 aaPredicted RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 SEC16AO15027 2179 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 WIPF3A6NGB9 483 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 C2orf74A8MZ97 194 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 GOLGA6L22H0YM25 854 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 BTN3A3O00478 584 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ZG16O60844 167 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 CAPN1P07384 714 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 SNRPB2P08579 225 aaKnown RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 H2AFZP0C0S5 128 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 CBSLP0DN79 551 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 PRF1P14222 555 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ZFXP17010 805 aaPredicted RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 PTPN3P26045 913 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 PRDX3P30048 256 aaKnown RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 CBSP35520 551 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 HADHAP40939 763 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 PRKG2Q13237 762 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 SSPNQ14714 243 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 TEX44Q53QW1 395 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 KAZNQ674X7 775 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ZNF449Q6P9G9 518 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 FAM180AQ6UWF9 173 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 RBM43Q6ZSC3 357 aaKnown RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 CDHR3Q6ZTQ4 885 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 H2AFVQ71UI9 128 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 CUZD1Q86UP6 607 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 TRIM73Q86UV7 250 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ZC3H18Q86VM9 953 aaKnown RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 MCEMP1Q8IX19 187 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 SLC34A3Q8N130 599 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ZNF655Q8N720 491 aaPredicted RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ST6GALNAC3Q8NDV1 305 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 PHC3Q8NDX5 983 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 OR52E1Q8NGJ3 308 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 OR2L2Q8NH16 312 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 DNAJB14Q8TBM8 379 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 HM13Q8TCT9 377 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ZNF398Q8TD17 642 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 TFB1MQ8WVM0 346 aaKnown RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 INPP5DQ92835 1189 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 HAUS1Q96CS2 278 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 TRAPPC9Q96Q05 1148 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 NRTNQ99748 197 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 WDR77Q9BQA1 342 aaPredicted RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 NDC1Q9BTX1 674 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 DHRS4Q9BTZ2 278 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 PACSIN1Q9BY11 444 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 FAM96AQ9H5X1 160 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 RUBCNLQ9H714 662 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ZBTB20Q9HC78 741 aaPredicted RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ATP13A2Q9NQ11 1180 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 HACD3Q9P035 362 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 IL17CQ9P0M4 197 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 TMEM63CQ9P1W3 806 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 UVRAGQ9P2Y5 699 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 DHCR7Q9UBM7 475 aaKnown RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 RSPH14Q9UHP6 348 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 FKBPLQ9UIM3 349 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 CDC23Q9UJX2 597 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ITGB1BP2Q9UKP3 347 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 NOVA2Q9UNW9 492 aaKnown RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 TDRKHQ9Y2W6 561 aaKnown RBP6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 PCDHGA10Q9Y5H3 936 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 CSAG2Q9Y5P2 127 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 ARL5AQ9Y689 179 aa6.47□□□□□ -1.37
RTFDC1-206ENST00000477485 MYO7BQ6PIF6 2116 aa6.46□□□□□ -1.37
RTFDC1-206ENST00000477485 A0A1B0GTH6 734 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 C2orf81A6NN90 581 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 CFAP99D6REC4 459 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 ANKRD17O75179 2603 aaKnown RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 SRP72O76094 671 aaKnown RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 POU3F2P20265 443 aaPredicted RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 ALAS2P22557 587 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 RIPPLY3P57055 190 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 TPM4P67936 248 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 DCDP81605 110 aaKnown RBP6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 BRD3Q15059 726 aa6.46□□□□□ -1.38
RTFDC1-206ENST00000477485 ZRSR2Q15696 482 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms