RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 A0A1B0GX30 115 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ASPDHA6ND91 283 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 FAM72CH0Y354 149 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 CPLX1O14810 134 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 TGFB1I1O43294 461 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ZBTB43O43298 467 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 NMT2O60551 498 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 CALM1P0DP23 149 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 CALM2P0DP24 149 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 CALM3P0DP25 149 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 EEF2P13639 858 aaKnown RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 KIF5BP33176 963 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 BSGP35613 385 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 VEGFCP49767 419 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 GNAQP50148 359 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 CCR9P51686 369 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 SREBF2Q12772 1141 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 OLIG2Q13516 323 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 PPP2R5BQ15173 497 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 CCDC96Q2M329 555 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 GPATCH4Q5T3I0 446 aaKnown RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 FAM72AQ5TYM5 149 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 FAM72DQ6L9T8 149 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 RGMBQ6NW40 437 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 FAM122CQ6P4D5 195 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 SLC36A4Q6YBV0 504 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 TMTC3Q6ZXV5 915 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 MTSS1LQ765P7 747 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 FAM72BQ86X60 149 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ERO1BQ86YB8 467 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 DSELQ8IZU8 1212 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ZCCHC9Q8N567 271 aaKnown RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 ZNF485Q8NCK3 441 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ETNPPLQ8TBG4 499 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ZKSCAN4Q969J2 545 aaPredicted RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 FAM149B1Q96BN6 582 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ZNF501Q96CX3 271 aaPredicted RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 SLC41A2Q96JW4 573 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 FAM110AQ9BQ89 295 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 C1QTNF5Q9BXJ0 243 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ALDH8A1Q9H2A2 487 aaPredicted RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 C17orf75Q9HAS0 396 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 MKKSQ9NPJ1 570 aaPredicted RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 NYAP2Q9P242 653 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 CLIP2Q9UDT6 1046 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 HAO1Q9UJM8 370 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 INTS6Q9UL03 887 aaKnown RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 ABT1Q9ULW3 272 aaKnown RBP3.93□□□□□ -1.78
UBR3-209ENST00000477461 CAMK2AQ9UQM7 478 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 ZHX2Q9Y6X8 837 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 MYH6P13533 1939 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 SSC5DA1L4H1 1573 aa3.93□□□□□ -1.78
UBR3-209ENST00000477461 IGKV6D-41A0A0C4DH26 115 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 C19orf81C9J6K1 198 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 PRSS1P07477 247 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 ITGA2P17301 1181 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 CD53P19397 219 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 MAOAP21397 527 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 SLC1A4P43007 532 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 CTCFP49711 727 aaPredicted RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 METAP2P50579 478 aaKnown RBP eCLIP3.92□□□□□ -1.78
UBR3-209ENST00000477461 HUNKP57058 714 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 AKAP17AQ02040 695 aaKnown RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 SPP2Q13103 211 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 IKQ13123 557 aaPredicted RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 VGLL4Q14135 290 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 CTF1Q16619 201 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 EIF2S3LQ2VIR3 472 aaKnown RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 USP41Q3LFD5 358 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 C6orf141Q5SZD1 244 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 STXBP5Q5T5C0 1151 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 ANKRD54Q6NXT1 300 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 GFRALQ6UXV0 394 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 MOB2Q70IA6 237 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 TMEM219Q86XT9 240 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 FOXRED2Q8IWF2 684 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.92□□□□□ -1.78
UBR3-209ENST00000477461 FBXL16Q8N461 479 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 WDSUB1Q8N9V3 476 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 SLC24A4Q8NFF2 622 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 PSPC1Q8WXF1 523 aaKnown RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 TAF15Q92804 592 aaKnown RBP eCLIP3.92□□□□□ -1.78
UBR3-209ENST00000477461 SNX21Q969T3 373 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 ZNF274Q96GC6 653 aaPredicted RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 SH3GL2Q99962 352 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 TMEM47Q9BQJ4 181 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 HAUS8Q9BT25 410 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 ESRP2Q9H6T0 727 aaKnown RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 LY9Q9HBG7 655 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 BPIFA1Q9NP55 256 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 RBM28Q9NW13 759 aaKnown RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 ABI3Q9P2A4 366 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 PADI1Q9ULC6 663 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 FAF1Q9UNN5 650 aaPredicted RBP3.92□□□□□ -1.78
UBR3-209ENST00000477461 KIF3AQ9Y496 699 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 STON1Q9Y6Q2 735 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 ITIH6Q6UXX5 1313 aa3.92□□□□□ -1.78
UBR3-209ENST00000477461 PHIPQ8WWQ0 1821 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 A0A1B0GU03 582 aa3.91□□□□□ -1.78
UBR3-209ENST00000477461 A0A1W2PS18 150 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms